CV884240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.015e-20 Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKR 474 K W PEED L+ V YG R W+ +P R+G SCR RW N L P ++ PFT EE++ +L+ HA GNKW+ +AR GRTDN IKN WN+ R Sbjct: 18 KSKWKPEEDRILKDYVIQYGDRTWT----HVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNARRMR 118
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLI-SKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSS 486 +G W+ +ED+AL V+ +G W + K+ R GKSCRLRW N L P + + +E++ I+R H GN+W+ IA L GRTDN IKN+WNSTL R+ + Sbjct: 14 RGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRRAGA 118
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 +G W+ ED+ L+ + +G WS + R GKSCRLRW N L P ++ + +E+E I+R H GN+W+ IA L GRTDN IKNHWNS L+++ Sbjct: 16 RGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKR 117
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.399e-19 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 +G W+ EED+ L + +G +W + K+ R GKSCRLRW N L V+ + EE++ I++ HA GN+W+ IA L GRTDN IKN+WNS L R+ Sbjct: 14 RGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 115
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.758e-18 Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KG W+ EED L++ + YG W +P R+G KSCRLRW N L P ++ F+ +E + +LR H GN+W+ IA L GRT N +KN+WN+ L +K Sbjct: 10 KGAWTAEEDSLLRQCIGKYGEGKWH----QVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.908e-18 Identity = 48/136 (35.29%), Postives = 69/136 (50.74%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK----CSSMSDESQVDAINPLPLKRANSVGP 555 KG W+ EED L++ + YG W +P R+G KSCRLRW N L P ++ + +E + +LR H GN+W+ IA L GRT N +KN+WN+ L +K C + + I P + N P Sbjct: 10 KGAWTTEEDSLLRQCINKYGEGKWH----QVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKKHEPCCKIKMKKRDITPIPTTPALKNNVYKP 141
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17 Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLPLKRANSVGP 555 KG W+ EED L+ + YG W +P R+G KSCRLRW N L P ++ + +E + +LR H GN+W+ IA L GRT N +KN+WN+ L +K S +S+ +K+ N + P Sbjct: 10 KGAWTAEEDSLLRLCIDKYGEGKWH----QVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKKHESSCCKSK--------MKKKNIISP 129
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.154e-17 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLIS-KSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KG W+ EED L++ + YG W + ++ R KSCRLRW N L P ++ +E + +LR H GN+W+ IA L GRT N +KN+WN+ L +K Sbjct: 10 KGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBL_DICDI (Myb-like protein L OS=Dictyostelium discoideum GN=mybL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.693e-16 Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFG-NKWATIARLLSGRTDNAIKNHWNSTLK 471 KG WSPEED+ L V YG NW LI + GR+ CR R+CN L PQ+ +TP+ED+ + + G KW+ +A+L+ RTDN W K Sbjct: 652 KGRWSPEEDQCLINAVNAYGKGNWILIKNHVKGRTDVQCRERYCNVLDPQLTKIRWTPQEDKRLFDITNKVGIGKWSDVAKLMENRTDNQCWRRWKQLNK 751
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 184 WSPEEDEALQRLVQNYGPRNWSLISKSIP---GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSD 495 W PEED L+ V+ YGPR W L+S+ + R KSC RW N L P ++ T EE ++R A+ GNKW IA + GRT + W +++ + D Sbjct: 7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRD 113 The following BLAST results are available for this feature:
BLAST of CV884240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884240 ID=CV884240; Name=CV884240; organism=Citrus sinensis; type=EST; length=773bpback to top |