CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQLL EMDG A + + +I ATNR DI+DPAL+RPGR D+ I + PD R ++LK R P+ + V+L +A +T F+GADL + AA +A R++ Sbjct: 257 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQN 385
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 53/127 (41.73%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D+I + QLL EMDG + +V ++ ATNR DI+D AL+RPGR D++I IP+PD++ RL+ILK + + +DV+LS ++ TE GADL IC A AIR Sbjct: 250 IFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIR 376
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.643e-21 Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LF DE+D+I M QLL E+DG NV VI ATNR D+IDPA++RPGR D++I +P+P RL IL RK ++ DVDL +A TE F+GADL + A AIR Sbjct: 236 LFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIR 362
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D+LI +P+P++E R I + L+K ++ LA+ TE F+GA++ +C A +AIR Sbjct: 231 VFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIR 357
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQLLTEMDG V V+ ATNR D++D AL+RPGR D+ I + +P+ RL+ILK +K + KDV L +A +T F+GADL + AA L +R Sbjct: 267 VFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVR 393
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLR----KTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LF DE+D++ +NQLL EMDG NV ++ TNRPDI+DPAL+RPGR D+ I+I PD + R SI K LR + + KD LA+ T F+GAD+ +C AA +A R Sbjct: 403 LFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAAR 533
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLR----KTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LF DE+D++ +NQLL EMDG NV ++ TNRPDI+DPAL+RPGR D+ I+I PD + R SI K LR + + KD LA+ T F+GAD+ +C AA +A R Sbjct: 404 LFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAAR 534
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I ++ +LL +MDG NV VI ATNR D +DPAL+RPGRLD+ I P+PD + I + K +S++VDL A+ +K +GAD+ ICQ LA+RE Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRE 389
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D+I ++ +LL +MDG NV VI ATNR D +DPAL+RPGRLD+ I P+PD + + V + +S DVDL A+ +K +GAD+ ICQ A A+RE+ Sbjct: 258 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVREN 386
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 LFFDE DSI V+NQ LT++DGV V+V+ AT+RPD+IDPAL+RPGRLD+ +Y +P++ RL IL + K +S + L L+ T+ +TGADL + A +I E Sbjct: 963 LFFDEFDSIAPRRGHDNSGVTDR---VVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHE 1087 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |