CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.903e-44 Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ +KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+P+SKDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.695e-44 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 90.1225 bits (222), Expect = 3.679e-18 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + +S DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.136e-43 Identity = 88/130 (67.69%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVDL +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 88.9669 bits (219), Expect = 8.195e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + ++ DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 2.530e-43 Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ KKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR++ILKA LRK+PV+KDVD+ +LA T F+GADLTEICQRA KLAIRE I Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESI 703 HSP 2 Score: 90.1225 bits (222), Expect = 3.679e-18 Identity = 53/128 (41.41%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DELD+I +++QLLT MDG+ + +V V+ ATNRP+ IDPAL R GR D+ + I +PD RL IL+ + +S DVDL +A +T GADL +C AA AIR+ Sbjct: 301 IFIDELDAIAPKREKTHGEVERR---IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.304e-43 Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+GAKKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD +SR +ILKA LRK+P++K+VDL+Y+A T+ F+GADLTEICQRA KLAIR+ I Sbjct: 571 LFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAI 700 HSP 2 Score: 87.4261 bits (215), Expect = 2.384e-17 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I +++QLLT MDG+ ++ V+ ATNRP+ IDPAL R GR D+ I I +PD RL +L+ + + DVDL +AA++ GADL +C AA IRE Sbjct: 298 IFIDEIDAIAPKRDKTHGEVERR---IVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 422
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 7.361e-43 Identity = 88/130 (67.69%), Postives = 100/130 (76.92%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDELDSI V+NQ+LTEMDG+ AKKNVF+IGATNRPDIIDPA++RPGRLDQLIYIP+PD SRL I KA LRKTP+S D+DL++LA T F+GADLTEICQRA KLAIRE I Sbjct: 579 LFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESI 708 HSP 2 Score: 87.4261 bits (215), Expect = 2.384e-17 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 LF DE+D+I +++QLLT MDG+ + +V VI ATNRP+ ID AL R GR D+ I I +PD RL IL+ + + +DVDL +A + F GADL +C AA IRE Sbjct: 306 LFIDEIDAIAPKREKAHGEVEKR---IVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIRE 430 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |