CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG V VI ATNR D++D AL+RPGR D+ I + MPD +SR++ILK + + V L +A +T F GADL + AA LA+R + Sbjct: 250 VFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGL 379
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLR----KTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LF DE+D++ +NQLL EMDG NV ++ TNRPDI+DPALMRPGR D+ I+I PD + R SI K LR + + K+ LA+ T F+GAD+ +C AA +A R Sbjct: 405 LFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAAR 535
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D++ + QLL EMDG ++ +V +I ATNRPDI+DPA++RPGR D++I I PD + RL I K K + K VDL +A E GAD+ +C A AIRE Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIRE 371
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: AFG2_YEAST (ATPase family gene 2 protein OS=Saccharomyces cerevisiae GN=AFG2 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.034e-20 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKD-VDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +FFDE+D++ V+ LL E+DGV K V ++ ATNRPD ID AL+RPGRLD+ IY+ PD +RL ILK +K + VDL LA +TE ++GA++ +CQ A AI ED+ Sbjct: 613 IFFDEIDALSPDRDGSSTSAANH---VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDL 740 HSP 2 Score: 85.8853 bits (211), Expect = 6.937e-17 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDV----DLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+DSI V+ LLT MDG+GA V VI ATNRP+ +DPAL RPGR DQ + I +PD ++R IL + + V + Y+A++T + GADLT +C+ + I+ + Sbjct: 342 IFIDEIDSIAPNRANDDSGEVESR--VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL 473
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.351e-20 Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKN-VFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQLL EMDG N V VI ATNR D++DPAL+RPGR D+ + + PD + R ++LK + P++ DVDL +A QT + GADL + AA +A R++ Sbjct: 289 IFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQN 418
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D+I ++ +LL +MDG NV VI ATNR D +DPAL+RPGRLD+ I P+PD + I + K +S++VDL A+ ++ +GAD+ ICQ A A+RE+ Sbjct: 259 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVREN 387
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXX-VMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRK--TPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDIM 394 +F DE+D++ +NQLLTEMDG + V V+GATNR D++DPAL RPGR D+++ + PD R SILK + K P+ DV+L+ +A+ T FTGADL + AA LA R+ M Sbjct: 425 IFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKM 558
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 83 MNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +NQ+L EMDG V VI ATNRPD++DPAL RPGR D+ + + +PD + R ILK +RK V++DVD LA T ++GADL + AA A R Sbjct: 20 LNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAAR 119
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQLLTEMDG + +I ATNRPD++D ALMRPGR D+ + + PDY R IL+ R ++ +V + +A +T F+GADL + AA L R Sbjct: 268 IFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTAR 394
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20 Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+DSI V+ +LL +MDG NV VI ATNR D IDPAL+RPGRLD+ I P+PD + + A+ K ++ VD+ L + EK + AD+ ICQ A LA+R Sbjct: 231 VFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVR 357 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |