CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: NVL_DICDI (Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum GN=nvl PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAA--QTEKFTGADLTEICQRAAKLAI 379 +FFDE D++ V+NQLLTEMDG+ + VF+I ATNRPDIID A+ RPGRLD+++Y+P+P E R ILK + K P+ +DVDL + + F+GADL+ + + AA AI Sbjct: 663 IFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAI 790
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.542e-24 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG A+ +V +IGATNRPDI+DPA++RPGR D++I +P PD + RL ILK RK +++DV+L +A TE GA+L IC A AIRE Sbjct: 267 IFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRE 394
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DELDSI + QLL EMDG +KN+ +I ATNRPD++DPA++RPGR D+L+++PMP E+R ILK K ++ D+D LA TE +GADL I A A+R+D Sbjct: 256 IFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKD 384
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.435e-24 Identity = 61/128 (47.66%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG + NV VI ATNRPDI+DPAL+RPGR D+LI +P+PD+E RL ILK R+ + K VDL +A TE +GADL I A AIRE Sbjct: 237 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRE 363
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.435e-24 Identity = 61/128 (47.66%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG + NV VI ATNRPDI+DPAL+RPGR D+LI +P+PD+E RL ILK R+ + K+VDL +A TE +GADL I A AIRE Sbjct: 237 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRE 363
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.486e-24 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +FFDE+DSI ++NQLL EMDG+ V +I ATNRPDI+DPAL+RPGR D+LIY+P PD +R ILK + P+++DV L +A + E +TGADL + + A A+R Sbjct: 584 IFFDEIDSIAPIRGLSTDSGVTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708 HSP 2 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 58/127 (45.67%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D+I V+ QLLT MDG+ + V VIGATNRPD IDPAL RPGR D+ I I PD + R IL+ R P++ DVDL LA T +TGADL + + AA A+R Sbjct: 309 IFIDEIDAIAPKREDVTGEVEKR---VVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALR 432
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.486e-24 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DELD+I M QLL E+DG + +V VIGATNR DI+DPA++RPGR D++I +P+P +E R+ I K RK +++DVD LA TE +GAD+ IC A AIRE+ Sbjct: 238 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREE 366
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.486e-24 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRA 364 LFFDE +SI V+NQLLT++DGV + V+V+ AT+RPD+IDPAL+RPGRLD+ +Y P PD SRL IL + P++ DVDL ++A+ T+ FTGADL + A Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDR---VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 1054
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.486e-24 Identity = 58/129 (44.96%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXX-VMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D++ +NQLL EMDG + VI ATNRPDI+DPAL+RPGR D+ I+IP PD R ILK R ++KDVDL ++A T FTGADL + AA LA R+ Sbjct: 251 IFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARK 379
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24 Identity = 61/128 (47.66%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG + NV VI ATNRPDI+DPAL+RPGR D+LI +P+PDY+ RL ILK RK + K VDL +A TE +GADL I A AIR+ Sbjct: 235 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRD 361 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |