CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGV--GAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRK--TPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+DS+ + + L E DGV + + V+GATNRP +D A++R R + +Y+ +P+ E+RL +LK +L K +P+++ +L+ LA T+ ++G+DLT + + AA IRE Sbjct: 435 IFIDEVDSLLCERREGEHDASRR---LKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQK-ELAQLARMTDGYSGSDLTALVKDAALGPIRE 560
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11 Identity = 42/133 (31.58%), Postives = 68/133 (51.13%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGV--GAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDV---DLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+DSI + + L + DG A + VIGATNRP +D A++R R + I + +PD E+R ++ L+K + + D+ Y+A+ T F+ +DL +C+ AA + IRE Sbjct: 335 IFIDEIDSILCERSEKDAEVSRR---MKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIRE 462
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+DS L +D G V V+GATNRP +D A++R R+ ++ +P+ R IL+ +L +S ++L +A+Q+E ++G+DL E+C+ AA +R+ Sbjct: 192 IFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLD-TGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRD 316 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |