CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.653e-24 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQ+L EMDG + + +I ATNRPD++DPAL+RPGR D+ + + +PD R ILK +RK P+SKDVD +A T F+GADL + AA A R D Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLD 376
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.995e-24 Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG + NV VI ATNRPDI+DPAL+RPGR D+LI +P+PD+E RL ILK R+ + + VDL +A TE +GADL I A AIRE Sbjct: 234 IFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRE 360
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.305e-23 Identity = 60/128 (46.88%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG + NV VI ATNRPDI+DPAL+RPGR D+LI +P+PD+ RL ILK RK + ++VDLS +A TE +GADL I A AIR+ Sbjct: 235 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRD 361
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.305e-23 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LFFDE +SI V+NQLLT++DGV + V+V+ AT+RPD+IDPAL+RPGRLD+ +Y P PD SRL IL + + ++ DVDL ++A+ T+ FTGADL + A A++ Sbjct: 938 LFFDEFESIAPRRGHDNTGVTDR---VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQ 1061
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23 Identity = 64/160 (40.00%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAK-------------------------------KNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+DSI V++ LL E+DGVG K NV V+ ATNRPD++D AL+RPGRLD++IYIP PD + RLSILK + TP+ DV L +AA+T F+GADL +C+ AA LA++E+ Sbjct: 563 VFLDEIDSILGSRSISRTECNVQDR-VLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQEN 721 HSP 2 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAI 379 LF DE+D++ V+ Q+LT +DG+G + V V+G+TNRPD +DPAL RPGR D+ + I P R +IL+ + K P+S VDL+ LA T + GADLT +C+ AA A+ Sbjct: 300 LFLDEVDALCPRRGGPHQAPESR---VVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL 422
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+DSI + QLL EMDG + NV ++ ATNRPDI+DPAL+RPGR D++I +PMP E+R ILK RK ++ DVDL +A T++ +GADL+ I A AIR + Sbjct: 256 IFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNN 384
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.908e-23 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + V +I ATNRPD++DPAL+RPGR D+ + + +PD R ILK +RK P+S+DVD +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.798e-23 Identity = 58/129 (44.96%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D+I + QLL EMDG ++ VI ATNR DI+DPAL+RPGR D+ I IP+PD E R I K R +++DVDL LA TE +GAD+ IC A +AIRED Sbjct: 276 IFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIRED 404
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.798e-23 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG + ++ ATNRPD++D ALMRPGR D+ + + PDY R IL R +S+DVDL +A +T FTGADL+ + AA LA R ++ Sbjct: 257 VFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNL 386
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD++ R I L+K + +++L L+ TE F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRD 358 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |