CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.105e-22 Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +FFDELDS+ V+NQLLTE+DG+ + V VI ATNRPDIIDPAL+R GR D+L+ + P E R ILK + TP++ DV L LA + + + G+DL I + AA A+R+D Sbjct: 559 IFFDELDSLAPGRGQTGGNNVSER--VVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685 HSP 2 Score: 93.9745 bits (232), Expect = 2.547e-19 Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DELDSI V+ QLLT MDG+ + V VI ATNR D +DPAL RPGR D+ I I +PD R ILK R P+S DV+LS LA T F GAD+ + + AA A+R Sbjct: 286 IFIDELDSIAPKREDVTGEVERR---VVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALR 409
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 LFFDE DSI V+NQ+LT+MDG V+V+ AT+RPD+ID AL+RPGRLD+ + MPD++ RL IL++V R VSK V+LS +A + F+GADL + A A+ E + Sbjct: 896 LFFDEFDSIAPKRGHDSTGVTDR---VVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKL 1022
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 55/135 (40.74%), Postives = 88/135 (65.19%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLR---KTPVSKDVDLSYLA--AQTEKFTGADLTEICQRAAKLAIREDI 391 +FFDE+D++ V+NQLLTEMDG+ ++ VF++ ATNRPDIIDPA++RPGRLD+ +++ +P R++ILK + + K P+ +DV+L +A + +TGADLT + + A+ A+R++I Sbjct: 677 IFFDEVDALCPRRSDRETGASVR---VVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEI 808 HSP 2 Score: 82.4185 bits (202), Expect = 7.670e-16 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMD---GVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDIM 394 +F DE+D+I ++ QLLT MD V A V VIGATNRPD +DPAL R GR D+ + + +PD +R IL+ + RK + + + +LA T F GADL +C+ AA A+ +M Sbjct: 360 VFIDEIDAITPKREVASKDMERR---IVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLM 490
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + + VI ATNRPD++DPAL+RPGR D+ + + +PD R ILK +R+ P++ D+D + +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + + VI ATNRPD++DPAL+RPGR D+ + + +PD R ILK +R+ P++ D+D + +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + + VI ATNRPD++DPAL+RPGR D+ + + +PD R ILK +R+ P++ D+D + +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + + VI ATNRPD++DPAL+RPGR D+ + + +PD R ILK +R+ P++ D+D + +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ +NQ+L EMDG + + VI ATNRPD++DPAL+RPGR D+ + + +PD R ILK +R+ P++ D+D + +A T F+GADL + AA A R Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQLL EMDG A + + +I ATNR DI+DPAL+RPGR D+ I + PD R +LK R P++ DV+L +A +T F+GADL + AA +A R D Sbjct: 262 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHD 390
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 59/131 (45.04%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKT----PVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 LF DE+D+I +NQ+L EMDG + NV V+ TNRPDI+DPAL RPGR D+ IYI PD + R SI K LR +SKD LAA T FTGAD++ +C AA +A R Sbjct: 396 LFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAAR 526 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |