CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL EMDG NV +I ATNRPDI+DPAL+RPGR D+LI +P+P+++SRL ILK ++ + K VDL +A TE +GADL I A AIR+ Sbjct: 236 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRD 362
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRE 385 +F DE+D+I + QLL E+DG NV +I ATNR DI+DPAL+RPGR D++I +P+PD+ R I L+K V +++L L+ +E F+GAD+ +C AA +AIR+ Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRD 358
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 55/135 (40.74%), Postives = 89/135 (65.93%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLR---KTPVSKDVDLSYLAA--QTEKFTGADLTEICQRAAKLAIREDI 391 +FFDE+D++ V+NQLLTEMDG+ A++ VF++ ATNRPDIIDPA++RPGRLD+ +++ +P RL+ILK + + K P+ DV+L +A + + +TGADL+ + + A+ A+R+++ Sbjct: 678 IFFDEVDALCPRRSDRETGASVR---VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 809 HSP 2 Score: 85.8853 bits (211), Expect = 6.937e-17 Identity = 54/134 (40.30%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMD---GVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDIM 394 +F DE+D+I ++ QLLT MD V A V VIGATNRPD +DPAL R GR D+ I + +PD SR IL+ + RK + + D +LA T F GADL +C+ AA A+ +M Sbjct: 361 IFIDEIDAITPKREVASKDMERR---IVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLM 491
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG V V+ ATNRPD++D AL+RPGR D+ + + PD R+ IL+ R ++KDVD +A +T FTGADL + AA LA R D+ Sbjct: 328 VFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDL 457
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLA--AQTEKFTGADLTEICQRAAKLAIREDI 391 +FFDELD++ V+N LLTE+DG+ + V+VI ATNRPDIIDPA++RPGRLD+ + + +PD R+ ILK + ++TP+ ++V+L L + F+GADL + + AA A+R + Sbjct: 589 IFFDELDAMVPRRDDSLSEASSR---VVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAV 717 HSP 2 Score: 73.1738 bits (178), Expect = 4.653e-13 Identity = 46/131 (35.11%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKN----VFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +F DE+D++ ++ Q LT MD + +K V VIGATNRPD +D AL R GR D+ I + +P ++R IL+ + + +S D D LA QT + GADL + A +AI+ Sbjct: 271 MFIDEIDAVTPKRESAQREMERR---IVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |