CX300926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQLL EMDG G + V +I ATNRPDI+DPAL+RPGR D+ I + PD R ++L+ + P++ D DL LA +T TGADL + AA L RE+ Sbjct: 259 IFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTAREN 387
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG V V+ ATNRPD++D AL+RPGR D+ + + PD R+ IL+ R ++KDVD +A +T FTG DL + AA LA R D+ Sbjct: 349 VFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDL 478
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 52/130 (40.00%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG V V+ ATNRPD++D AL+RPG+ D+ + + PD R+ IL+ R ++KDVD +A +T FTGADL + AA LA R D+ Sbjct: 326 VFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDL 455
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: RIX7_YEAST (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae GN=RIX7 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.163e-22 Identity = 53/131 (40.46%), Postives = 84/131 (64.12%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRK--TPVSKDVDLSYLA--AQTEKFTGADLTEICQRAAKLAIR 382 +FFDELD++ V+N LLTE+DG+ ++ +FVIGATNRPD+IDPA++RPGRLD+ ++I +P+ E +L I+K + + TP+S DVD + + F+GADL + + ++ LA++ Sbjct: 630 IFFDELDALVPRRDTSLSESSSR---VVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALK 757 HSP 2 Score: 75.0998 bits (183), Expect = 1.225e-13 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKN----VFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIR 382 +FFDE+D+I ++ QLLT MD + +K V +IGATNRPD +D AL R GR D+ I + +P+ SRL ILK + + +D + LA T F GADL + A AI+ Sbjct: 302 VFFDEIDAITPKRDGGAQREMERR--IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.163e-22 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ + QLL EMDG ++ +V +I ATNRPDI+DPA++RPGR D++I I MPD + RL ILK K + K VDL +A E GADL +C A AIRE+ Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREE 372
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.163e-22 Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D+I + QLL MDG + +V +IGATNR DI+D AL+RPGR D++I IP+PD E R SILK R +S+DVDL +A TE GA+L IC A AIR++ Sbjct: 250 VFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKE 378
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.163e-22 Identity = 58/132 (43.94%), Postives = 77/132 (58.33%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXX-VMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVL--RKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ +NQLLTEMDG V V+GATNR D++DPAL RPGR D+++ + PD R SILK + ++ P+ KDVDLS +AA T FTGADL + AA LA R + Sbjct: 442 IFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSN 573
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.355e-22 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ + QLL EMDG ++ +V +I ATNRPDI+DPA++RPGR D++I I MPD + RL ILK K + K VDL +A E GADL +C A AIRE+ Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREE 372
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.355e-22 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIRED 388 +F DE+D++ + QLL EMDG ++ +V +I ATNRPDI+DPA++RPGR D++I I MPD + RL ILK K + K VDL +A E GADL +C A AIRE+ Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREE 372
BLAST of CX300926 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.355e-22 Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 2 LFFDELDSIXXXXXXXXXXXXXXXXXVMNQLLTEMDGVGAKKNVFVIGATNRPDIIDPALMRPGRLDQLIYIPMPDYESRLSILKAVLRKTPVSKDVDLSYLAAQTEKFTGADLTEICQRAAKLAIREDI 391 +F DE+D++ +NQLLTEMDG V V+ ATNRPD++D AL+RPGR D+ + + PD R+ IL+ R ++KDVD +A +T +TGADL + AA LA R ++ Sbjct: 349 VFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARREL 478 The following BLAST results are available for this feature:
BLAST of CX300926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300926 ID=CX300926; Name=CX300926; organism=Citrus sinensis; type=EST; length=394bpback to top |