EH117778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.734e-19 Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I K APT+G++VDHRRKNRSLE LQ+NVQRLKTY+A LV+FPR +K KA +++ + + A+Q +G +P+ KP +E V Sbjct: 85 IPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELV 166
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_CHICK (60S ribosomal protein L13 OS=Gallus gallus GN=RPL13 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.734e-19 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 I+K+ A TIG+SVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+PEEL ATQ+ GP MPI Sbjct: 86 INKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_BOVIN (60S ribosomal protein L13 OS=Bos taurus GN=RPL13 PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.277e-18 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 IHKK+A TIG+SVD RR+N+ E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_CRIGR (60S ribosomal protein L13 OS=Cricetulus griseus GN=RPL13 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 3.717e-18 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 IHKK+A TIG+SVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP M I Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.845e-17 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 9 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTV---EPVTQD 263 I A TIG++VD RRKN+SLE Q N+QRLK Y++KL++FP +K +AG+S+ EE ATQ++GP +PI E+P V VT+D Sbjct: 85 IGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKD 172
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.010e-17 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 I+K++A TIG++VD RR+NRS E L NVQRLK Y++KL++FPR+ K GDS EE+ ATQ+ GP MPI Sbjct: 86 INKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_LUMRU (60S ribosomal protein L13 OS=Lumbricus rubellus GN=RPL13 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.945e-15 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 36 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP----IAPEK 263 I+KK A IG+SVD RR+N+S+E LQ NVQRLK Y++KL++FP++ K GD+ EE+ ATQ++G +P I PEK Sbjct: 62 INKKEARAIGISVDVRRRNKSVESLQLNVQRLKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKPEK 141
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_SCHMA (60S ribosomal protein L13 OS=Schistosoma mansoni GN=RPL13 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.569e-15 Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 ++ K A TIG++VDHRR+N S+EGLQ NV RLK YKAKL++FP K +A D+ +E+ ATQ++ P +PI Sbjct: 85 LNPKFARTIGIAVDHRRRNVSVEGLQRNVARLKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPI 156
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_CAEEL (60S ribosomal protein L13 OS=Caenorhabditis elegans GN=rpl-13 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.554e-14 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 45 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIA 263 I + A TIG++VD RR N++ EGL++N RLK YKAKL++FP++A K GDS+ EEL A Q++G +P++ Sbjct: 86 ISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLS 158
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_SPOFR (60S ribosomal protein L13 OS=Spodoptera frugiperda GN=RpL13 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.616e-13 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = -3 Query: 33 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKP 263 ++ A TIG++VD RR+N+S+E LQ NVQRLK Y+A+L++FP + +K G++ EE ATQ++GP MP+ P Sbjct: 85 LNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 160 The following BLAST results are available for this feature:
BLAST of EH117778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117778 ID=EH117778; Name=EH117778; organism=Citrus sinensis; type=EST; length=274bpback to top |