EH117778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.523e-32 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I KKLAPTIG++VDHRRKNRSLEGLQ+NVQRLKTYK KLV+FPRRARK KAGDS PEELA ATQVQG Y+PI EKPT+E V Sbjct: 84 IPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELV 165
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I KKLAPTIG+SVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRR+R+ KAGDS PEELA ATQVQG YMPIA K +E V Sbjct: 84 IPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELV 165
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.529e-31 Identity = 67/82 (81.71%), Postives = 71/82 (86.59%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I KKLAPTIG+S+DHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK +E V Sbjct: 84 IPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELV 165
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.455e-30 Identity = 67/82 (81.71%), Postives = 70/82 (85.37%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I KKLAPTIG++VDHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK E V Sbjct: 84 IPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELV 165
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.721e-27 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = -3 Query: 18 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVEPV 263 I KKLAPTIG+SVDH RKNRSLEG Q+NVQRLKTYKAKLV+FPR AR K GDSA +ELA ATQVQ +MPI E PT+E V Sbjct: 84 IPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELV 165
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 3.971e-20 Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 I+KK+A TIG+SVD RR+NRS E LQ+NVQRLK Y+ KL++FPR+A K K GDS EEL ATQ+ GP MPI Sbjct: 86 INKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.509e-19 Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 36 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEK 263 I KKLAPTIG++VDHRR+NRSLEGLQ+NVQRL+ + +LVVFPRRA + + P TATQV G YMPI EK Sbjct: 80 IPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREK 155
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_RAT (60S ribosomal protein L13 OS=Rattus norvegicus GN=Rpl13 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.574e-19 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 IHKK+A TIG+SVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_MOUSE (60S ribosomal protein L13 OS=Mus musculus GN=Rpl13 PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 3.362e-19 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 IHKK+A TIG+SVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157
BLAST of EH117778 vs. ExPASy Swiss-Prot
Match: RL13_HUMAN (60S ribosomal protein L13 OS=Homo sapiens GN=RPL13 PE=1 SV=4) HSP 1 Score: 93.2041 bits (230), Expect = 4.391e-19 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = -3 Query: 48 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 263 IHKK+A TIG+SVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MP+ Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPV 157 The following BLAST results are available for this feature:
BLAST of EH117778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117778 ID=EH117778; Name=EH117778; organism=Citrus sinensis; type=EST; length=274bpback to top |