CX671881

Overview
NameCX671881
Unique NameCX671881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.969e-89
Identity = 169/222 (76.13%), Postives = 185/222 (83.33%), Query Frame = 3
Query:  105 MAGKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSG 770
            MAGK LMHA+QYNSYGGGAA L+HV++PVPTP  +EV LKLEAT+LNPVDWKIQKG +RPFLPRKFPCIPATD            K FKAGDKVVA L++L   GGGLAEFAVA E  TV RP EV AAE + LPVAGLTA QALT  AG+KLDG+G++ NILVTAASGGVGHYAVQLAKL N HVTA+CGARNIEFVKSLGADEVLDYKTP+GAALKSPSG
Sbjct:    1 MAGK-LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHL--GGGGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSG 219          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 157/222 (70.72%), Postives = 177/222 (79.73%), Query Frame = 3
Query:  105 MAGKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSG 770
            MA K LMHA+QY+ YGGG   LKHVE+ VP P  DE+LLK+EA  LNP+DWKIQKG LRP LPRKFP IP TD              FK GDKVVA L++    GG LAE+AVAKE+ TVARP EVSAAEG+ LPVA LTAHQALTQ A +KLDGSG++KNIL+TAASGGVGHYAVQLAKLGNTHVTA+CGARN++FVK LGADEVLDYKTP+GA+L SPSG
Sbjct:    1 MAAK-LMHAIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSH--ATGGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSG 219          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.386e-20
Identity = 72/212 (33.96%), Postives = 103/212 (48.58%), Query Frame = 3
Query:  123 MHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNG----GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQ---SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDY 731
            M A  Y+ YGG         + VP   +D+VL+K+ A ALNPVD K ++G+ +       P +P  D            K  K GD+V A ++     G    G LAE+   +E     +P  +  A+ +GLP+A  TA + L +   SAG         K+ILV   +GGVG   +QLAK   G + V A+     +E V+SLGAD  +DY
Sbjct:   78 MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKA-TDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAG---------KSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDY 279          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.889e-18
Identity = 67/230 (29.13%), Postives = 102/230 (44.35%), Query Frame = 3
Query:   84 HRVLAVKMAGKPLMHAVQYNSYGGGAA--DLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDY 731
            +R  +   A + +M A   + YG        K+  LP+     +EV++K+ A  LNP+D  ++ G     +  K            FP I   D            K FK GD+V A +       G LAEF V   +    +P  +   E + +P    TA  A+  + G+  D S + K +L+   SGGVG +A+Q+ K    HVT +C       V+ LGAD+V+DY
Sbjct:   16 YRSFSFSAARRTVMPAWVIDKYGKNDVLRFTKNAALPI-IHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP--PWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAK-KRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDY 241          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  207 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKT 737
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            K FK GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D +   K +L+  ASGGVG +A+Q+ K  + HVTA C     E V+ LGAD+V+DYK+
Sbjct:   72 NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKS 257          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18
Identity = 63/198 (31.82%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  207 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPD-GAALKS 761
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            + FK GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D +   K +L+  ASGGVG +A+Q+ K  + HVTA C     E V+ LGAD+V+DYK+ +  A LKS
Sbjct:   72 NEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLN-DRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKS 266          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.172e-17
Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 3
Query:  207 DEVLLKLEATALNPVDWKIQKGQLRPFLPRK------------FPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDY 731
            +EV++K+ A ++NP+D  ++ G     L  K            FP     D            K F+ GD+V A +       G L+EF V   +    +P  ++  + + LP   LTA  A+ +  G+  D + + K  L+  ASGGVG +A+Q+ K    HVTA C     E V+ LGADEV+DY
Sbjct:   72 NEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVP--PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLS-DKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDY 255          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16
Identity = 64/214 (29.91%), Postives = 101/214 (47.20%), Query Frame = 3
Query:  111 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD 743
            G+ LM A++   +GG        ++ VP P   +VL+K++A  +NPVD  I+ G   ++P L    P  P  D              FK GD+V        T  GG AE+A+A + +    P ++   +G+ + +   TA++AL  SA VK       +++LV  ASGGVG  A Q+A+     V  +       + V   GA +V ++K  D
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNIKPLL----PYTPGFDVAGIIEAVGESVSAFKKGDRVFT----TRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVK-----PGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEAD 204          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16
Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 3
Query:  111 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKG--QLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 734
            G+ LM A++   +GG        ++ VP P   +VL+K+ A  +NPV+  I+ G    +P L    P  P +D              FK GD+V  F     T  GG AEFA++ +++T   P  +   +G+ L +   TA +AL  SA  +       +++LV  ASGGVG    Q+A+     V  + G+    + V   GA EV ++K
Sbjct:    4 GQKLMRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSRKPAL----PYTPGSDVAGIIESVGDGVSAFKKGDRVFCF----STVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAG-----ESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHK 201          
BLAST of CX671881 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16
Identity = 63/209 (30.14%), Postives = 99/209 (47.37%), Query Frame = 3
Query:  111 GKPLMHAVQYNSYGGGAADLKHVELPVPTPSKDEVLLKLEATALNPVDWKIQKGQLRPFLPRKFPCIPATDXXXXXXXXXXXXKIFKAGDKVVAFLNYLVTNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIE-FVKSLGADEVLDYK 734
            G+ LM A++ + +GG        ++ VP P + +VL+K++A  +NPVD  I+ G        + P  P  D              FK GD+V        T  GG AE+A+A + +    P E+   +G+ + V   TA++AL  SA  K       +++LV  ASGGVG  A Q+A+     V  + G    +  V   GA EV +++
Sbjct:    4 GQRLMRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYS--RKPRLPYTPGLDVAGLIEAVGERVSAFKKGDRVFT----TSTVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAG-----ESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHR 201          
The following BLAST results are available for this feature:
BLAST of CX671881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
QORH_ARATH6.969e-8976.13Putative quinone-oxidoreductase homolog, chloropla... [more]
QORH_SPIOL1.964e-8370.72Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
QORL_ARATH1.386e-2033.96Quinone oxidoreductase-like protein At1g23740, chl... [more]
RT4I1_DANRE2.889e-1829.13Reticulon-4-interacting protein 1 homolog, mitocho... [more]
RT4I1_HUMAN3.773e-1831.75Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_BOVIN4.928e-1831.82Reticulon-4-interacting protein 1, mitochondrial O... [more]
RT4I1_MOUSE4.172e-1731.55Reticulon-4-interacting protein 1, mitochondrial O... [more]
QOR_BOVIN3.532e-1629.91Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
QOR_RAT4.613e-1630.33Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_LAMGU4.613e-1630.14Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13F11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13F11-K21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671881 ID=CX671881; Name=CX671881; organism=Citrus sinensis; type=EST; length=771bp
CACTGCGTTACATACATATTATAATCGTATGCAGAGTGGTCTCTTTGATT
CTATCGATAGCACACTCGAAATCCCAGAAACGGCATCGTGTATTAGCTGT
GAAAATGGCAGGAAAGCCTCTTATGCACGCGGTTCAGTATAATTCTTATG
GTGGAGGAGCTGCTGATTTGAAGCATGTTGAACTGCCGGTTCCTACCCCA
AGCAAAGATGAGGTTTTGCTTAAACTTGAAGCAACTGCTCTAAATCCGGT
TGACTGGAAAATCCAGAAGGGCCAGTTACGCCCTTTTTTGCCTCGCAAGT
TTCCTTGCATACCTGCAACTGATGTAGCAGGAGAGGTCGTAGGGGTAGGA
TCAGAAGTTAAAATTTTCAAAGCTGGTGACAAAGTTGTAGCTTTTCTTAA
CTACCTCGTAACTAATGGAGGTGGACTAGCTGAGTTTGCTGTGGCTAAGG
AGAGCTCGACAGTTGCTAGGCCATCAGAGGTTTCAGCAGCTGAAGGTTCT
GGCTTGCCTGTTGCTGGTCTCACTGCTCACCAGGCCCTTACTCAATCTGC
AGGTGTCAAGCTTGATGGAAGTGGGCAACAGAAAAACATTCTAGTAACTG
CTGCCTCAGGGGGTGTAGGTCACTATGCTGTTCAGTTGGCGAAGCTTGGA
AACACGCACGTGACTGCCTCTTGTGGGGCTCGCAACATTGAATTTGTCAA
GAGTTTAGGGGCTGATGAGGTTCTTGATTACAAGACACCTGACGGGGCAG
CTCTAAAGAGTCCATCTGGTC
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