GO242034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV+ ++G KGT+ F+ EG GPT V GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.102e-21 Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ + G GT+ F+ +G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F + K IPL+G S+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV+ GT+ KGT+ FS EG GPTTV GS+SGL PG H +H G+ +N +STGP F P G + G L N+T +G+ I + IPL+G +S+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLAGTDV-KGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 149
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 62/150 (41.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ + GT+ FS +G PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I + IPL+G S+IGRG+VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 59/150 (39.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ + G GT+ F+ GPTTV G +SGL PG H +H G+ +N +STGP F PAG + G L N+ V +G +F I + IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/150 (40.67%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AV V+ + KGT+ F EG GPTTV GS+SGL PG H IH G+ +N +STGP + PAG + G L N+T +G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 61/150 (40.67%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AV V+ + KGT+ F EG GPTTV GS+SGL PG H IH G+ +N +STGP + PAG + G L N+T +G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 64/151 (42.38%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ + G GT+ FS E G PTTV G LSGL PG H +H G+ +N +STGP + P G D G L N+TV +G A F I K IPL G S+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 151
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20 Identity = 57/129 (44.19%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 376 MV AV V++G+ G G + F+ E GPTTV G LSGL PG H +H G+ +N +STGP + PA + G L N+TV +G A F I K IPL G+ S+IGR +VVH+ P D G G Sbjct: 1 MVKAVTVLSGSGGVSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPD-DLGKG 128
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.362e-20 Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 M VAV+ + G KGT+ F+ EG+G TTV G++SGL PG H +H G+ +N +STGP F P G G L NI V +G ATF I + IPLSG NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MAKGVAVLNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGL 150 The following BLAST results are available for this feature:
BLAST of GO242034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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