GO242034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24 Identity = 68/150 (45.33%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ + G GT+ FS EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G A+F I K IPL+G NSVIGR +VVH P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 66/150 (44.00%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AV V++ + G GTV F+ EGSGPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G ATF I + IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24 Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 376 MV AVAV+TG+ G +GTV F+ EG GPTT+ GSLSGL PG H +H G+ +N +STGP F PAG + G L N+TV +G F + + IPL+G NSV+GR +VVH+ S D G G Sbjct: 1 MVKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHAD-SDDLGKG 128
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23 Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV++ +N GT++FS EG+GPTTV G+L+GL PG H IH G+ +N ISTGP F P G + G L NI V +G +F I IPL+GTNS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23 Identity = 65/150 (43.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G I + IPLSG+NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23 Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 376 MV VAV++ + G GT+ F+ EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G A F I K IPL+G +S+IGR +VVH+ P D G G Sbjct: 1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPD-DLGKG 128
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22 Identity = 62/150 (41.33%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV+ + G KGT+ FS EG GPT+V GS+SGL PG H +H G+ +N +STGP F P G + G L NIT ++G+A + + IPL+G +S+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.531e-22 Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 MV AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.223e-22 Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 400 M AV V++ + G GTV F+ EG GPTTV G++SGL PG H +H G+ +N +STGP + P G + G L NITV +G ATF I + IPLSG NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGL 150
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22 Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 376 MV AVAV+ + G GT+ F+ +G+ PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL+G S+IGR +VVH+ P D G G Sbjct: 1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128 The following BLAST results are available for this feature:
BLAST of GO242034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
|