GO242034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16 Identity = 56/153 (36.60%), Postives = 78/153 (50.98%), Query Frame = 2 Query: 20 STMVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIA-TFEIYKTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 S AVAV+ GT+ +G V+ + + SGPTTV ++GL PG H +H +G+ +N ISTGP F P G L NI ++G+A T + IPL+G NSV+GR VVH S + + G +A G IGL+ Sbjct: 62 SAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLT 214
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 35 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 AV+V+ GT+ +G V+ + + GPTTV ++GL PG H +H YG+ +N ISTGP F P GA G L NI +EG+A I IPL+G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 53 AVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLT 200
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 35 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 AVAV+ GT+ +G V+ + E GPTTV ++GL PG H +H +G+ +N ISTGP F P G G L NI ++G+A I IPL+G N+V+GR VVH S + + G +A G +GL+ Sbjct: 71 AVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLT 218
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 26 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHS 349 ++ AVAVI G N KG++ F + +G T VKG ++GL PG H IH G+ +N STGP F P D G L N+ ++G+A + T IPLSG +S++GR +VVH+ Sbjct: 3 VIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHA 122
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16 Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 2 Query: 29 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP-----AGAD------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 376 + AV V+ GT GTV F GP T+KGS++GL PG H +H +G+ +N IS GP + P G D G L N+ G+A FEI + + LSG S+IGR LVVH D G G Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEK-EDDLGKG 127
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15 Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 35 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 AVAV+ G + +G V+ + E PTTV ++GL PG H +H YG+ +N ISTGP F P GA G L NI + G+A I IPL+G NSVIGR LVVH S + + G +A G +GL+ Sbjct: 53 AVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 200
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.014e-15 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 35 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP------AGAD-----GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 AVAV+ G + +G V+ S + GPTTV ++GL PG H +H YG+ +N +STG F P A D G L NI ++G+A + IPL+G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 68 AVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 215
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 57/148 (38.51%), Postives = 74/148 (50.00%), Query Frame = 2 Query: 35 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 AVAV+ GT+ G V+ E GPTTV ++GL PG H +H YG+ +N ISTG F P GA G L NI +G+A I IPLSG+NSV+GR VVH S + + G +A G +GL+ Sbjct: 67 AVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 214
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 68 KGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPA----GAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 403 +G V+ S E +GPTTVK L+GL PG H +H +G+ +N +STG F P GA G L NI S+G+A I IPLSG +SVIGR LVVH S + + G +A G +GL+ Sbjct: 3 EGVVTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 139
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 29 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 376 + AV V+ G+ KGT++F + G TV G +SGL PG H IH YG+++N S+G F P GA G L NIT S G+AT I + I L+G +S+IGR +VVH+ D G G Sbjct: 3 IKAVCVLVGSV--KGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAG-EDDLGKG 127 The following BLAST results are available for this feature:
BLAST of GO242034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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