GO242034

Overview
NameGO242034
Unique NameGO242034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242034 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 45/116 (38.79%), Postives = 59/116 (50.86%), Query Frame = 2
Query:   68 KGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSPSPDPGDG 376
            KGTV F  E    P  V G ++GL  G H   +H +G+ +N  +S+GP F P G +           G L NIT T +G    +I    I L G NS+IGR +VVH+ P  D G G
Sbjct:    6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPD-DLGKG 120          
The following BLAST results are available for this feature:
BLAST of GO242034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
SODC_DROBS7.492e-1138.79Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosoph... [more]

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Properties
Property NameValue
Genbank description682 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 825 5, mRNA sequence.