DY257268

Overview
NameDY257268
Unique NameDY257268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1319
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.828e-41
Identity = 85/160 (53.12%), Postives = 108/160 (67.50%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV T   E TS +PPEKLFK F+L  D L+PKV P  VK  E++ GDGG G+IKK  F EG+ + Y KHRVD +DK+N  Y+YT I  EGDA    I++++Y+ K+V +PDGGS       ++ K   EIKEEQVK G EK  G+FK +EAY LANP+A
Sbjct:    1 MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLI--EGDALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.471e-38
Identity = 78/160 (48.75%), Postives = 106/160 (66.25%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV T   E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++DKEN  Y+YT I  EGDA   T++ +SYE+K+V +P GGS       ++ K   EIKEE VK G EK   +FK +E Y   +P+A
Sbjct:    1 MGVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLI--EGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 1.499e-35
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV T   E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++D+ N  Y YT I  EGDA   TI+ VSYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGVYTFENEYTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLI--EGDALTDTIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 9.716e-35
Identity = 77/162 (47.53%), Postives = 107/162 (66.05%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV T   E TS +PP +LFK FVL  D L+PK+ PQ +K  E++ G+GGPG+IKK  F EG+ + Y KHR+D++D+ +  Y+YT I  EGDA   TI+ +SYE+K+V     GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGVYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLI--EGDALTDTIEKISYETKLVAC---GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.269e-34
Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MG+ T   E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ G+GGPG+IKK  F EG+ + Y KHRVD++D+ +  Y YT I  EGDA   TI+ +SYE+K+V +   GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGLYTFENEFTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLI--EGDALTDTIEKISYEAKLVAS---GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 6.963e-33
Identity = 75/162 (46.30%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV    +E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYEIETTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 1.188e-32
Identity = 75/162 (46.30%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV     E TS +P  +LFK F+L+ D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDNLIPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.456e-32
Identity = 75/162 (46.30%), Postives = 101/162 (62.35%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 4.513e-32
Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 516
            MGV     E TS +P  ++FK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of DY257268 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.894e-32
Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   37 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 513
            MGV     E TS + P +L+K  V   D L+PKV+   ++++E++ G+GG G+IKK  FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+ESK+   PDGGS + + +K++ K  A   EE++KGG  +  G+FKALE Y LANP+
Sbjct:    1 MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
The following BLAST results are available for this feature:
BLAST of DY257268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PRU1_PRUAR1.828e-4153.13Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV2.471e-3848.75Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO1.499e-3548.13Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
MAL11_MALDO9.716e-3547.53Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
PYRC1_PYRCO1.269e-3447.53Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
BEV1D_BETVE6.963e-3346.30Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1G_BETVE1.188e-3246.30Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
BEV1A_BETVE3.456e-3246.30Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
BEV1L_BETVE4.513e-3245.68Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
PR1_MEDSA5.894e-3242.77Class-10 pathogenesis-related protein 1 OS=Medicag... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK1DB07FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257268 ID=DY257268; Name=DY257268; organism=Citrus sinensis; type=EST; length=1319bp
TTTCATCTTCTTTCTTTGTTTAACTCTTAGACAATCATGGGTGTTCTCAC
GTTGAATGTAGAGGATACAAGCACTCTCCCCCCTGAAAAGTTGTTCAAAC
TTTTTGTCCTTCAGTTCGACACCCTTCTGCCCAAAGTCCTGCCTCAGGTT
GTAAAGAACGTTGAATTGATTTCAGGGGATGGAGGCCCTGGAAGCATCAA
GAAGTTTAACTTTGTTGAAGGTGCTGATTGGAAGTACTTTAAGCATAGGG
TTGATGCATTGGACAAAGAGAACAAGATATACAATTACACGGCAATTGAA
GGTGAGGGTGATGCTAACATCCCTACTATTGATCATGTTTCTTATGAGAG
TAAGGTTGTGGGCACCCCTGACGGAGGAAGCAAGAGCACCGTTGTTATCA
AGTTCTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGGTTAAGGGA
GGCTTGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCCTATGCCTT
GGCAAACCCCAATGCCGTATAAGCTCTTACGTCAACACTTCACCGCACTT
GCGTCGCCTTTGTTGCAACATTATGAATAATCATGTTTATGGCTTCCGTA
TGTCGTGTCTCTTTGTTTTCAAATATGCCAATTTATATAATTGGCTTTTG
GCTAAATAAAAAAAAAAAAGAGTTTGCTTTTCCCTTTTTTAAAAAAAAAC
AGCTGACGAAGCTAAAATGATCATATGGTATCGGAGAACTCAAGAAAAAA
CTAGAAAAAACAAAGAGCCCCCCCCTTTTTTTTGTAACAATGGTGGATTT
AAAAAAAAGTTTGTTTTTCATTTTTTGGTAAGAAAAAGGGGACAACTCAT
AAAAAAAAAAAAATATTTATTTCCCCCCCACCAGTACTCCCAACATGGGG
GGGAATGATAAGAGATAAGGGGTTTTCCGCGAACCCTTCCGCGCCGGTTC
CCAAACCCTGAAGGTAATTTTGCGAAAAAAAAAAATAATATCTTTCTTTG
AAAAAAACACATCGCAAGCAACCAAAGAAAAGGCCGTTTTTTCTCTATAA
TAGATATAACAAAACAACATTTTTTGTAAAACACCGCTTCTTGTATGTGA
GGAAAAAAAAACACCTAAAGGCAGCCGCCCGCCCAAAAGGGAAGGAACAA
TCTACGGAATAGGGCGGTTGCGAATTTCTACCTTCGGCACACACAAAACA
GATACCTCACAATAATTTATTGCCCTGCGCTCGCTCTCAACAAAAGATGT
TAAGATAAACAATGGAAATGAGAAATTGTCGACGCACGGGAGTGAGTGGT
AACGCGAGGTTACTCCGAG
back to top