DY257267

Overview
NameDY257267
Unique NameDY257267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1259
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.009e-25
Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = -1
Query:  459 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREY 710
            GSRRVIQISA FM+FFS+ GKFGAFFASIP  I A++YC++   V+S GLSFLQF N+NS    FI G + F+ +S+P+YFREY
Sbjct:  310 GSRRVIQISAAFMLFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSAGLSFLQFCNLNSFNTKFILGFSFFMAISIPQYFREY 393          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 2.486e-24
Identity = 63/182 (34.62%), Postives = 100/182 (54.95%), Query Frame = -1
Query:  213 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAK----------------ALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNEEFYTLPFNLNRFF 710
            GSRRV+++ A  ++ FS++GK G F ASIP  + A++ C ++ +  ++GLS L+++   S RN+ I G++LF  LSVP YF++Y                   + HGP  ++    N  +NT+   S  +A I+AV LDNT+    S ++RG+  W    T   +    + Y LPF + RFF
Sbjct:  522 GSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLCFMWAMFTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQPYIVSSHGPFKSQYKGMNYVMNTLLSMSMVIAFIMAVILDNTV--PGSKQERGVYVWSDSETATREPALAKDYELPFRVGRFF 701          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.246e-24
Identity = 66/165 (40.00%), Postives = 94/165 (56.97%), Query Frame = -1
Query:  222 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNE--EFYTLPFNLN 710
            GSRRVIQ  A  M+   M+GKF A FAS+P  +  A++C LFG++ +VGLS LQF ++NS RNLF+ G ++F GL +P Y R+        P  T     +  LN +  ++  V   VA  LDNT+    + ++RG+  W K    KG+   +  E Y LPF +N
Sbjct:  451 GSRRVIQYGAALMLGLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-------NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTI--PGTPEERGIKKWKK-GVSKGNKSLDGMESYNLPFGMN 605          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 4.240e-24
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = -1
Query:  222 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNE--EFYTLPFNLN 710
            GSRRVIQ  A  M+   M+GKF A FAS+P  +  A++C LFG++ +VGLS LQF ++NS RNLF+ G ++F GL +P Y R+        P  T     +  LN +  ++  V   VA  LDNT+    + ++RG+  W K    KG    +  E Y LPF +N
Sbjct:  452 GSRRVIQYGAALMLGLGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-------NPLVTGITGIDQILNVLLTTAMFVGGCVAFILDNTI--PGTPEERGIKKWKK-GVSKGSKSLDGMESYNLPFGMN 606          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.240e-24
Identity = 66/165 (40.00%), Postives = 94/165 (56.97%), Query Frame = -1
Query:  222 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNE--EFYTLPFNLN 710
            GSRRVIQ  A  M+   M+GKF A FAS+P  +  A++C LFG++ +VGLS LQF ++NS RNLF+ G ++F GL +P Y R+        P  T     +  LN +  ++  V   VA  LDNT+    + ++RG+  W K    KG+   +  E Y LPF +N
Sbjct:  454 GSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQ-------NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTI--PGTPEERGIRKWKK-GVGKGNKSLDGMESYNLPFGMN 608          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.589e-23
Identity = 64/163 (39.26%), Postives = 92/163 (56.44%), Query Frame = -1
Query:  225 SRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNE--EFYTLPFNL 707
            SRRVIQ  A FM+   M+GKF A FAS+P  +  A++C LFG++ +VGLS LQF ++NS RNLF+ G ++F GL +P Y ++        P  T     +  LN +  ++  V    A  LDNT+    + ++RG+  W K    KG +  E  E Y LPF +
Sbjct:  453 SRRVIQYGAAFMLLLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFVDLNSSRNLFVLGFSIFFGLMLPSYLKQ-------NPLVTGIAEIDQVLNVLLTTAMFVGGCTAFILDNTI--PGTPEERGIRKW-KRGVGKGTSGIEGMESYDLPFGM 605          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.360e-21
Identity = 63/179 (35.20%), Postives = 91/179 (50.84%), Query Frame = -1
Query:  213 SRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYT--------------AKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDTRNEEFYTLPFNLNRFF 707
            SRR + I A F+I  S LGK GA  ASIP  + A+V C ++ L  S+GLS L++T   S RN+ I GV+LFLGLS+P YF++Y                 A  GP  T     +  +N +   +  V  ++A  LDNT+    S ++RG+  W +    + D      Y+LP    + F
Sbjct:  528 SRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLRYTQTASFRNITIVGVSLFLGLSIPAYFQQYQPLSSLILPSYYIPFGAASSGPFQTGIEQLDFAMNAVLSLNMVVTFLLAFILDNTV--PGSKEERGVYVWTRAEDMQMDPEMRADYSLPRKFAQIF 704          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.484e-21
Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = -1
Query:  225 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDT-RNEEFYTLPFNL 710
            GSRRV+Q  AG M+    +GKF A FAS+P  I   ++C LFG++ +VGLS LQF +MNS RNLF+ G ++F GL++P Y       +  G  +T     +  L  +  +   V   +A  LDNT+    S ++RG+  W        +T  + + Y  PF +
Sbjct:  402 GSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYL-----DSNPGAINTGVPEVDQILTVLLTTEMFVGGCLAFILDNTV--PGSPEERGLIQWKAGAHANSETLASLKSYDFPFGM 557          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 9.775e-21
Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = -1
Query:  225 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWVKFRTFKGDT-RNEEFYTLPFNL 710
            GSRRV+Q  AG M+    +GKF A FAS+P  I   ++C LFG++ +VGLS LQF +MNS RNLF+ G ++F GL++P Y       +  G  +T     +  L  +  +   V   +A  LDNT+    S ++RG+  W        +T  + + Y  PF +
Sbjct:  402 GSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYL-----DSNPGAINTGIPEVDQILTVLLTTEMFVGGCLAFILDNTV--PGSPEERGLIQWKAGAHANSETSASLKSYDFPFGM 557          
BLAST of DY257267 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.843e-19
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  291 GSRRVIQISAGFMIFFSMLGKFGAFFASIPFTIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSVPEYFREYTAKALHGPAHTRAGWFNDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWW 710
            GSRRV+Q  A  M+    +GKF A FAS+P  I   ++C LFG++ +VGLS LQF +MNS RNLF+ G ++F GL++P Y      ++  G  +T     +  L  +  +   V   +A  LDNT+    S ++RG+  W
Sbjct:  395 GSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYL-----ESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTV--PGSPEERGLIQW 527          
The following BLAST results are available for this feature:
BLAST of DY257267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT9_ARATH5.009e-2563.10Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]
NAT12_ARATH2.486e-2434.62Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
S23A2_RAT3.246e-2440.00Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE4.240e-2440.00Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_HUMAN4.240e-2440.00Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A2_XENTR3.589e-2339.26Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
NAT11_ARATH3.360e-2135.20Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
S23A1_RAT7.484e-2136.20Solute carrier family 23 member 1 OS=Rattus norveg... [more]
S23A1_MOUSE9.775e-2136.20Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_HUMAN1.843e-1938.57Solute carrier family 23 member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DB06FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257267 ID=DY257267; Name=DY257267; organism=Citrus sinensis; type=EST; length=1259bp
GAACAAAGAATAAATTATTGCATTAAACCCAAATAATTCGAGTTAAATTT
ACATATGAGATGAAAATAGGGAGAGAAACCAGAGTCATCATTTCTCTGCC
ATGCAAAACATATCCATCTCTGTCTCAAGTCTTCTCTGCAGTAGCTCGGA
GTTATCATTTCTTTTCTAGAAATGACAGCCTCTTTTAATATGACGCTACT
TCATGATGGAGGGAAGAAACGGTTGAGGTTGAAAGGGAGGGTGTAGAATT
CCTCATTCCGGGTGTCTCCTTTAAATGTGCGGAATTTAACCCACCATGGC
ATGCCTCTGTCTTTGGCACTGTCCTTGTAATCGAGTGTGTTGTCCAAGAA
AACAGCGACAATCAACGCAACAGTTGGAGATGAGAAGAATATGGTGTTCA
GGAAGTCATTGAACCATCCAGCCCTGGTGTGAGCAGGACCATGAAGAGCC
TTGGCAGTGTATTCTCTGAAGTATTCAGGAACCGACAAACCTAAGAAGAG
GGCTACACCGGTGATGAAGAGGTTCCTCATTGAGTTCATGTTTGTGAATT
GCAAAAATGATAGCCCCACAGAAGCAACGAGACCAAACAGGACACAGTAT
ACAGCAGCAAAAATGGTGAAGGGGATTGATGCAAAAAAAGCACCAAATTT
TCCTAGCATTGAGAAAAATATCATAAATCCAGCCGAGATTTGAATGACCC
TCCGGCTCCCACACGAGTGCTTCCAAGAACCCCACATTTTCTACCGAGAC
AAAAAAACCGCTCAATGGTCCAAAGAATCCACTCGGTAGGATCCCATTCC
CTGCCAGCCAAAACCCGGCAAAAAACCGGGGCAGGAGGGGGGGTGGCATT
TGGAAAACCGGAAGCCCCCTTGTTGCTCCAGTTGACTCAATCAATGGAAC
CAGAACGGGCACCCATCACCCAAAAGCAGGACCCACCATCAAAGGGTAGG
AACCCCCCCTGAAAAGAAAATTGGGAATTTTAATCCTGGAAACAAAAAAA
TTAAAGTTGGGCCTTGTCAGTTCCGGCCAATCTTTTTGGGTAAAACTCGA
GAAAATTTTTAAAAACGCCCCATCGGCGGGTCACGAAGCGGGGGGATTTC
CCCCCCAACCCCCGGTGTAAGGGTTTTTGAGAAGGAAAGGGAAACACCCC
CCCTCTTATTTCGGGGAAAAGGTGCCTTGTGCCTTTTATAAAAAACCCTT
CCCCAACAAAAGGATGGCGGGAAAAAGAAGGGTGCCTAAACAAAAGAAAG
AAATAAGAA
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