DT214534

Overview
NameDT214534
Unique NameDT214534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8218 contig Csv1_Contig8218:133..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAES (Serine acetyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-14
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG+ IL              SVVL+ VP  TT VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKEKGKRHPDIGDNVLIAAGSKILGNIKIESNVNIGANSVVLQSVPSYTTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAEQ (Serine acetyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-14
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG+ IL              SVVL+ VP  TT VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKEKGKRHPDIGDNVLIAAGSKILGNIKIESNVNIGANSVVLQSVPSYTTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: NIFP_AZOCH (Probable serine acetyltransferase OS=Azotobacter chroococcum mcd 1 GN=nifP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = -2
Query:  265 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI----GGKENPFMLD 543
            VV+GETA IG +V++ H VTLGGT    G RHP +G+ VLVGAG  IL              SVV++DVP   T VG P +++     G+ NP+ +D
Sbjct:   87 VVIGETAEIGRDVTLYHGVTLGGTTGAKGKRHPTLGDVVLVGAGAKILGPITIGANARVGANSVVVQDVPEGCTVVGIPGKVVKLREAGQLNPYGID 183          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAW (Serine acetyltransferase OS=Staphylococcus aureus (strain MW2) GN=cysE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAS (Serine acetyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=cysE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   88 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 170          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAR (Serine acetyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=cysE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   88 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 170          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAN (Serine acetyltransferase OS=Staphylococcus aureus (strain N315) GN=cysE PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAM (Serine acetyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysE PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_STAAC (Serine acetyltransferase OS=Staphylococcus aureus (strain COL) GN=cysE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            VV+GET  IG NV+I   VTLGGTGK  G RHP IG+ VL+ AG  +L              SVVL+ VP  +T VG P  ++
Sbjct:   86 VVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIV 168          
BLAST of DT214534 vs. ExPASy Swiss-Prot
Match: CYSE_BUCAI (Serine acetyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.140e-13
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = -2
Query:  295 VVVGETAVIGHNVSILHNVTLGGTGK-MSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXGSVVLKDVPPRTTAVGNPARLI 543
            +V+GE   I ++VSILH+VTLGGTGK  S +RHP I  GV++GAG  IL             GS+VLK+VP   T VG PA+++
Sbjct:  162 IVIGEGVTIENDVSILHSVTLGGTGKNFSQNRHPTIRKGVVIGAGAKILGNIEVGSGAKIGAGSIVLKNVPSDVTVVGVPAKIV 245          
The following BLAST results are available for this feature:
BLAST of DT214534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CYSE_STAES2.867e-1449.40Serine acetyltransferase OS=Staphylococcus epiderm... [more]
CYSE_STAEQ2.867e-1449.40Serine acetyltransferase OS=Staphylococcus epiderm... [more]
NIFP_AZOCH3.744e-1444.33Probable serine acetyltransferase OS=Azotobacter c... [more]
CYSE_STAAW1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_STAAS1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_STAAR1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_STAAN1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_STAAM1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_STAAC1.858e-1346.99Serine acetyltransferase OS=Staphylococcus aureus ... [more]
CYSE_BUCAI4.140e-1348.81Serine acetyltransferase OS=Buchnera aphidicola su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10D01_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-10D01-H1-1-4.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214534 ID=DT214534; Name=DT214534; organism=Citrus sinensis; type=EST; length=544bp
GTAATAGACTTGGCAACATCTTATGACCACACACCGAAAAAGCCGATCAA
AAACTACAACATAACATCAACAATGTTGCAAATCTAGCAACATACAATAA
TCTTAATAAACGACCTGTTTGCTAATGGGGAGAACTTCAGTTCTCACTCA
CAACTCAAGCAAAATCCACACTAACGAAGATGGAAACAAATTAGCCCTCT
AGATAACATAATCAGACCATTCATGTATATGTGATGTGTGGTCCATTGTG
AAGCTAGGGATTTTATCAAGCATGAATGGATTTTCCTTTCCCCCAATCAG
CCTAGCCGGGTTACCAACAGCAGTTGTTCTTGGTGGAACATCCTTTAAAA
CTACAGAACCAGCACCAATTTTAGCCCCATCACCGATCTTAATGTTCCCC
AAAATGCAAGTGCCTGCACCAACCAACACCCCGTTCCCAATTTTCGGATG
CCTATCACCAGACATTTTCCCTGTGCCCCCTAATGTAACATTGTGCAAAA
TTGACACATTATGTCCGATCACCGCCGTCTCTCCGACGACAACT
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