CX300791

Overview
NameCX300791
Unique NameCX300791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.416e-15
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +   F EG+ +KY K RVD +D+ N  Y+++ IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E+Y LA+ +A
Sbjct:   51 PGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: MPAC1_CARBE (Major pollen allergen Car b 1 isoforms 1A and 1B OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 327
            P + +   F EG  +K+ K RVD +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E+Y LA+
Sbjct:   51 PGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGDVLGDK----LEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEKMKGAKEMAEKLLRAVESYLLAH 155          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 1
Query:   31 FVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 333
            FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E+K+   P+GGS + + +K++ K  A   EEQ+K    K  G+FKALE Y LA+P+
Sbjct:   58 FVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLKTDKAKGDGLFKALEGYCLAHPD 156          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 36/110 (32.73%), Postives = 69/110 (62.73%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 333
            P + +   F+E  + K+  H+++++D+ N  Y+Y+ +   G A +P T + ++++SK+V  P+GGS   + +K+  K  AE  ++++K G  K   +FKA+EAY LA+P+
Sbjct:   50 PGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVV---GGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 156          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 327
            P + +   F EG+ +KY K RVD +D  N  Y+YT IEG+  GD     ++ V +E K+V  P GGS   +  KF+ K   EI  E++KG  E  + + +A+E Y LA+
Sbjct:   51 PGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGDK----LEKVCHELKIVAAPGGGSILKISSKFHAKGDHEINAEEMKGAKEMAEKLLRAVETYLLAH 155          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of CX300791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
BEV1D_BETVE8.304e-1641.07Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1A_BETVE1.416e-1541.07Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
MPAG1_ALNGL9.181e-1541.07Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
MPAC1_CARBE2.045e-1438.53Major pollen allergen Car b 1 isoforms 1A and 1B O... [more]
DRR3_PEA2.045e-1438.61Disease resistance response protein Pi49 OS=Pisum ... [more]
SAM22_SOYBN3.489e-1432.73Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
MPAC1_CORAV3.489e-1438.53Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
BEV1J_BETVE3.489e-1438.39Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1F_BETVE3.489e-1438.39Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
BEV1E_BETVE3.489e-1438.39Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC08002C08SK PhyRootSw1 Citrus sinensis cDNA clone C08002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300791 ID=CX300791; Name=CX300791; organism=Citrus sinensis; type=EST; length=430bp
CTCGTGCCGAATTCGGCACGAGGGTTTAACTTTGTTGAAGGTGCTGATTG
GAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAGATAT
ACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTACTATT
GATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACCCCTGACGGAGGAAG
CAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAGATTA
AGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGAAGGGAATTTTTAAG
GCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCCGTATAAGCTCTTAC
GTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGCAACATTATGAATAA
TCATGTTTATGGCTTCCGTATGTCGTGTCT
back to top