CX300791

Overview
NameCX300791
Unique NameCX300791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22
Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 1
Query:   31 FVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            F EG+ + Y KHRVD +DK+N  Y+YT IEG  DA    I++++Y+ K+V +PDGGS       ++ K   EIKEEQVK G EK  G+FK +EAY LANP+A
Sbjct:   59 FGEGSQYAYVKHRVDGIDKDNLSYSYTLIEG--DALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.479e-20
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +   F EG+ + Y KH++D++DKEN  Y+YT IEG  DA   T++ +SYE+K+V +P GGS       ++ K   EIKEE VK G EK   +FK +E Y   +P+A
Sbjct:   51 PGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEG--DALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 1
Query:   31 FVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 333
            FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+ESK+   PDGGS + + +K++ K  A   EE++KGG  +  G+FKALE Y LANP+
Sbjct:   58 FVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +   F EG+ + Y KHRVD++D+ +  Y YT I  EGDA   TI+ +SYE+K+V +   GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   51 PGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLI--EGDALTDTIEKISYEAKLVAS---GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +   F EG+ + Y KH++D++D+ N  Y YT IEG  DA   TI+ VSYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   51 PGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLIEG--DALTDTIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.673e-16
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +   F EG+ + Y KHR+D++D+ +  Y+YT I  EGDA   TI+ +SYE+K+V     GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   51 PGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLI--EGDALTDTIEKISYETKLVAC---GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.673e-16
Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 333
            P + +   FVE  + KY  H+V+ +D  N   NY+ + G G  +  T++ +S+E+K+   P+GGS + + +K+Y K  A   EE++K G  K +GIFKALE Y +ANP+
Sbjct:   50 PGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGKAKGEGIFKALEGYCVANPD 156          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16
Identity = 41/109 (37.61%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 333
            P + +   FVEG    Y  H+V+A+D     YNY+ + G G ++I  ++ +S+E+K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FKA+EAY LANPN
Sbjct:   50 PGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX300791 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 8.304e-16
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    7 PNSARGFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 336
            P + +  NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   51 PGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of CX300791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
PRU1_PRUAR3.481e-2250.98Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV9.479e-2042.73Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
PR1_MEDSA4.704e-1944.55Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
PYRC1_PYRCO9.809e-1742.86Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
MAL12_MALDO9.809e-1741.82Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
MAL11_MALDO1.673e-1641.96Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
DRR4_PEA1.673e-1638.53Disease resistance response protein DRRG49-C OS=Pi... [more]
ABR18_PEA2.185e-1637.61ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
BEV1L_BETVE8.304e-1641.07Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
BEV1G_BETVE8.304e-1641.07Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionC08002C08SK PhyRootSw1 Citrus sinensis cDNA clone C08002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300791 ID=CX300791; Name=CX300791; organism=Citrus sinensis; type=EST; length=430bp
CTCGTGCCGAATTCGGCACGAGGGTTTAACTTTGTTGAAGGTGCTGATTG
GAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAGATAT
ACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTACTATT
GATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACCCCTGACGGAGGAAG
CAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAGATTA
AGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGAAGGGAATTTTTAAG
GCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCCGTATAAGCTCTTAC
GTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGCAACATTATGAATAA
TCATGTTTATGGCTTCCGTATGTCGTGTCT
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