CN189319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33 Identity = 73/126 (57.94%), Postives = 94/126 (74.60%), Query Frame = 2 Query: 380 ALRSTFARKAQSSEQRPQ-YALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 ++RS +R + S+ + +A + KVAVLGAAGGIGQPLALL+K++PLVS L LYD+ GVAAD+ H NT S+V + G E+L AL+G ++V+IPAGVPRKPGMTRDDLFNINA IVK+ Sbjct: 8 SVRSAVSRSSSSNRLLSRSFATESVPERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKS 133
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 73/125 (58.40%), Postives = 91/125 (72.80%), Query Frame = 2 Query: 386 RSTFARKAQSSEQ---RPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 RS R A +Q R +A + KV +LGAAGGIGQPL+LL+K++PLVS+L LYD+ N GVAAD+ H NT SQV + G ++L AL+G ++V+IPAGVPRKPGMTRDDLFNINA IVK Sbjct: 3 RSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVK 127
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A ++ +R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPASAALRR-SFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_PONAB (Malate dehydrogenase, mitochondrial OS=Pongo abelii GN=MDH2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A S+ R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPA-SAVLRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A ++ +R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPASAALRR-SFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A ++ +R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPAGAALRR-SFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_PIG (Malate dehydrogenase, mitochondrial OS=Sus scrofa GN=MDH2 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.522e-32 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A ++ +R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPAGAALRR-SFSTSXQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.522e-32 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 S AR A ++ +R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 3 SALARPAGAALRR-SFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 425 RPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 R ++ Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG ++VVIPAGVPRKPGMTRDDLFN NA IV T Sbjct: 14 RRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 123
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAGVPRKPGMTRDDLF INA IVKT Sbjct: 47 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKT 145 The following BLAST results are available for this feature:
BLAST of CN189319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189319 ID=CN189319; Name=CN189319; organism=Citrus sinensis; type=EST; length=754bpback to top |