CN189319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAG+PRKPGMTRDDLF INA IVKT Sbjct: 43 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKT 141
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAGVPRKPGMTRDDLF INA IV+T Sbjct: 47 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRT 145
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 392 TFARKAQSSEQRPQYALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 T + A +S R + KVA+LGAAGGIGQPL LL+K PLV+ L LYDV+N GVAADLSH ++ ++V TGP+EL +A++ +++VIPAGVPRKPGMTRDDLFN NA IV+ Sbjct: 7 TLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVR 126
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 326 TSVICESNTSFLNKESCSALRSTF---ARKAQSSEQRPQYALQPQASF-----------KVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 +S+ +SN + N C L F A + +S ++A Q F KVAVLGAAGGIGQPL++L+KM+ VS+L LYD+ GVAAD+SH NT +QV F + LA AL+G ++V+IPAGVPRKPGMTRDDLF INA IV+ Sbjct: 5 SSIRADSNCTLPNNPVCVLLPVDFIVAAMASSTSSAMAKWAAQAARGFAAAAPSSGKGRKVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAGIVR 159
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 2 Query: 479 AAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIV 748 A+GGIG+PL+LL+K SPL+S L LYD+ +VKGVAADLSH T + V GP ELA L G N+V+IPAG+PRKPGMTRDDLFN NA+IV Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIV 90
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 455 SFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEE-LASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 +FKVAVLGA GGIGQPL++L+K++ VS L L+D+ GVAAD+ H NT S V+ + ++ L AL G ++V+IPAGVPRKPGMTRDDLF NA+IV+ Sbjct: 28 AFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVR 127
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFT--GPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 +KV VLGA GGIGQPL+LL+K++ V+ L LYD+ KGVA DLSH T S V FT P+ L +ALK ++V+IPAGVPRKPGMTRDDLF INA+IV+ Sbjct: 18 YKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVR 117
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVKT 754 KVA+LGA+GG+GQPL+LL+K+SP VS L LYD+ +G+ DLSH NT S + + + + + L +V+IPAGVPRKPG+TRDDLF +NA IVK+ Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKS 99
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23 Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMS-PLVSALHLYDVMNV-KGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 KVAVLGAAGGIGQ L+LL+K P S L LYDV V GVA DLSH T +V F G ++LASAL G +IV+IPAGVPRKPGM R DLFN+NA IVK Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAGIVK 99
BLAST of CN189319 vs. ExPASy Swiss-Prot
Match: MDH_PSEA6 (Malate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=mdh PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22 Identity = 63/99 (63.64%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMS-PLVSALHLYDVMNV-KGVAADLSHCNTPSQVLDFTGPEELASALKGVNIVVIPAGVPRKPGMTRDDLFNINANIVK 751 KVAVLGAAGGIGQ L+LL+K P + L LYDV V GVA DLSH T +V F G ++LA AL G +IV+IPAGVPRKPGM R DLFNINA IV+ Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGTELALYDVAPVVPGVAVDLSHIPTDVKVEGF-GKDDLAKALTGSDIVLIPAGVPRKPGMDRSDLFNINAGIVR 99 The following BLAST results are available for this feature:
BLAST of CN189319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189319 ID=CN189319; Name=CN189319; organism=Citrus sinensis; type=EST; length=754bpback to top |