CN189314

Overview
NameCN189314
Unique NameCN189314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STAAC (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  170 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV*K 652
            GG G  K   NYA  L A   A   G+  VL+LD V +K +EEV S NIF V+   + TP  NG+IL GITR+S+IE+A++ GY+VEER + +DEL  +       +VF +GTA V++PVG++ Y+++ +      +  + Q+LY    GIQ G +EDK GW V V K
Sbjct:  190 GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPK 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 70/166 (42.17%), Postives = 92/166 (55.42%), Query Frame = -2
Query:  176 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINAD------QVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLVGIQTGVIEDKKGWTVEV 652
            GG G  K   NYA  L+A  +A   G+  VL+LD++ +K VEEV S NIF V      TPA +G+IL G+TR S IE+ R +G  V E  I +DE+  A       +VF TGTA VV PVG +    K V    G    + ++LY T+  IQ G ++    WTVEV
Sbjct:  191 GGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSILSGVTRASAIELIRSWGIPVREERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKLYETITDIQLGKVKGPFNWTVEV 356          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.208e-24
Identity = 65/162 (40.12%), Postives = 89/162 (54.94%), Query Frame = -2
Query:  188 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVD------ELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGW 652
            GG G  K   NYA  L A   A ++G   V YLD++ RK VEE+   N++ V GN I TP+  G+ILEG+TR S++ +ARD GY+ EE  + VD      E     +VF  GTA V+ PVG++     + +   G +  V Q L   L+ IQ G + D  GW
Sbjct:  196 GGMGDAKTGGNYAASLLAQAEAAAKGCDQVCYLDAIERKWVEELGGMNLYFVYGNKIVTPSLTGSILEGVTRDSLLTVARDLGYEAEEGRVSVDQWQRDSENGTLTEVFACGTAAVITPVGTVKRAGAQWQQSGGETGEVTQRLRDALLDIQRGTVADPHGW 357          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21
Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = -2
Query:  188 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN----VISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDE------LINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLVGIQTGVIEDKKGW 652
            GG G  K   NYA  L A   A + G   V++LD+V R+ VEE+   NIF V G+     + TP  +G++L G+TR S++++A D G+ VEER I +DE           +VF  GTA  + PV  + Y +       G+   V   L  TL GIQ G   D  GW
Sbjct:  198 GGTGAAKFGGNYAASLLAQTEAAANGCDQVVWLDAVERRFVEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGVTRASLLQLAIDAGFSVEERKIDIDEWQKKAAAGEITEVFACGTAAFITPVSRVKYGDTEFTIAGGAPGEVTMALRDTLTGIQRGTFADTHGW 363          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20
Identity = 62/166 (37.35%), Postives = 83/166 (50.00%), Query Frame = -2
Query:  188 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN----VISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDE------LINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLVGIQTGVIEDKKGW 652
            GG G  K   NYA  L A   A   G   V++LD+V R+ +EE+   NIF V G+     + TP  +G++L GITR S++++A D G+ VEER I +DE           +VF  GTA V+ PV  + +         G    V   L  TL GIQ G   D  GW
Sbjct:  198 GGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRIADGQPGEVTMALRDTLTGIQRGTFADTHGW 363          
The following BLAST results are available for this feature:
BLAST of CN189314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ILVE_STAAW4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAS4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAR4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAC4.142e-3343.45Probable branched-chain-amino-acid aminotransferas... [more]
ILVE1_BACSU1.291e-2642.17Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]
ILVE_STRCO1.208e-2440.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCLE8.103e-2137.35Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCTU2.358e-2037.35Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189314 ID=CN189314; Name=CN189314; organism=Citrus sinensis; type=EST; length=665bp
TTTTTTTTTTTTTTTAATGTTCATATTTCTTTCATTTATTACCATCAGCT
TTGATGGGATTTAAAAATACATGGAAACTTTTTTTTTTACCTTACATAAT
ATGGGGCCAACAGCATTTTGTAACGACATTCTGTAAGTAAGCATAGCATT
ATTGGTGTTTAAACTTTGATTTTTAAACCTCCACAGTCCATCCTTTCTTA
TCCTCAATAACACCCGTTTGAATTCCTACGAGAGTTGAGTACAATTCCTG
ATACACCGAGCGTGACCCTGTTTTAAATTCAACTCTTTTATTTTGATATG
TGATACTGCCCACTGGAGCAACAACTACAGCGGTTCCAGTGCAAAATACT
TGGTCGGCATTGATCAGTTCGTCCACAGGAATAACACGTTCCTCAACCTG
ATAGCCATAATCCCTGGCAATTTCAATTACACTTCTTCTGGTAATCCCTT
CAAGAATAGTTCCATTTGTAGCGGGAGTTGAAATTACATTGCCCTTTACA
ACAAAAATGTTACAAGAAGAGACTTCCTCCACATTTTTCCTATTGACCGA
GTCAAGGTACAAGACATCCGAAAATCCTCTGCTCTTGGCTCGGATTAATG
CTTTCAGAACAGGAGCATAATTGCTGATTGCTTTTACCCCTCCAGCGCCG
CCGCAAAAATGAAAT
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