CN189314

Overview
NameCN189314
Unique NameCN189314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18
Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = -2
Query:  176 GAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDY-GYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 649
            G GGVK   NYA  L A   A  +G+ D +YLD      +EEV + N F +  +       + +IL  IT++S++ +A++Y   +VEER I +DEL    +    GTA ++ P+  I + NK   F+     + + LY  L+ IQ G  E  K W  EV
Sbjct:  182 GTGGVKVGGNYAASLLAHKMATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIVHNNKSYFFEAPGH-ITKRLYDLLLSIQQGEQEAPKDWIFEV 339          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = -2
Query:  176 GAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDY-GYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 649
            G GGVK   NYA  L A   A  +G+ D +YLD      +EEV + N F +  +       + +IL  +TR+S++ +A+++   +VEER I +DEL    +    GTA ++ P+  I + NK   F+    ++ ++LY  L+ IQ G  E  K W  EV
Sbjct:  182 GTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNKSYSFEAPG-NITKQLYDLLLSIQQGEQEAPKDWIFEV 339          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT_NEMVE (Branched-chain-amino-acid aminotransferase OS=Nematostella vectensis GN=v1g246094 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.697e-16
Identity = 59/172 (34.30%), Postives = 91/172 (52.91%), Query Frame = -2
Query:  176 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN-----VISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINAD------QVFCTGTAVVVAPVGSITYQNKRVEFKT-GSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 652
            GG G  K   NYAP + A   A+ +G   VL+L   + + + EV + N+F+   N      + TP  NG IL G+TR S++ +A+ +G ++V ER   + +++ A       ++F +GTA VV P+  I YQ K +   T  + +V + +Y  L GIQ G  E  K W V V
Sbjct:  234 GGVGDCKMGGNYAPTILAQQNAERQGLQQVLWLFGEDHQ-ITEVGTMNMFMFWINENGEKELVTPPLNGLILPGVTRDSLLALAKRWGEFKVTERTFNMQDVLMATEENRMLEMFGSGTACVVCPINRIFYQGKNIMIPTMENLNVTKRVYDELTGIQYGRQEGPKDWIVMV 404          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16
Identity = 61/167 (36.53%), Postives = 85/167 (50.90%), Query Frame = -2
Query:  176 GAGGVKAISNYAPVLKALIRAKSRG-----FSDVLYLDSVNRKNVEEVSSCNIF-VVKGNVISTPATNGTILEGITRRSVIEIARD-YGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEF--KTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 649
            G GGVK   NYA  L     A  +G     F+D +YLD      +EEV + N F + K N   TP +  +IL  IT+ S++ IA++  G +  E  + +D+L    +    GTA V+ PVG I +  K   F  +T    V + LY  L GIQ G IE  +GW V+V
Sbjct:  177 GTGGVKVGGNYAASLLPHELAAEQGTPERKFADAIYLDPKTHTKIEEVGAANFFGITKDNKFITPKSE-SILPSITKYSLLHIAKERLGMEAIEGDVYIDQLDQFVEAGACGTAAVITPVGGIQHNGKFHVFDSETEVGPVTRRLYDELTGIQFGDIEAPEGWIVKV 342          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT_CAEEL (Branched-chain-amino-acid aminotransferase, cytosolic OS=Caenorhabditis elegans GN=bcat-1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -2
Query:  176 FCGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN------VISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNK--------RVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 658
            F GG G  K   NYAP +     A S+    VL+L   N +++ EV + NIF+   N      +I+ P   G IL G+TR S++E+ R++G Y+V ER + ++E+  A       ++F +GTA VV+PVG I Y NK         +   +    V Q+ Y+T+  IQ G I  K GW  ++
Sbjct:  236 FPGGVGAYKMGCNYAPTIWVGKEAASKNCQQVLWLYGEN-EDLTEVGTMNIFLFWKNEEGDMELITPPLHRGLILPGVTRDSLLELGREWGEYKVTERTLNMEEVKKALSEKRLYEMFGSGTACVVSPVGKILYHNKVTDEYEELHIPTMSSKFGVMQKFYNTINDIQYGRI-IKDGWMRDI 415          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT_DICDI (Branched-chain-amino-acid aminotransferase OS=Dictyostelium discoideum GN=bcaA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14
Identity = 54/178 (30.34%), Postives = 93/178 (52.25%), Query Frame = -2
Query:  176 FCGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN------VISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKR----VEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 658
            + GG+G  K  SNYAP +   + A  +GFS VL+L       V EV + N+FV   N      +I+ P  +GTIL G+TR S++++ + +G +++ E+   + EL  A       + F  GTA +V+P+ SI+Y+ +     ++       + + +  +++ IQ G  E    W+V V
Sbjct:  205 WAGGSGAFKLGSNYAPTIFPQLEAAKKGFSQVLWL---LNDYVTEVGTMNMFVFWNNAQGEKELITPPLGDGTILPGVTRDSILKLTQQWGEFKITEKNFTMTELAKAIKEGRVFEAFGAGTAAIVSPIESISYKGENYSIPIDASLNCGPLTKRISDSIMAIQYG--ETNSDWSVIV 377          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT1_RAT (Branched-chain-amino-acid aminotransferase, cytosolic OS=Rattus norvegicus GN=Bcat1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14
Identity = 57/173 (32.95%), Postives = 88/173 (50.87%), Query Frame = -2
Query:  176 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNV-----ISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT--GSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 652
            GG G  K   NY   L A   A   G   VL+L     + + EV + N+F+   N      ++TP  +G IL G+TR+S++E+  ++G ++V ER I +D+L  A       ++F +GTA VV PV SI Y+ + +   T      +   + + L  IQ G I  K  WT+E+
Sbjct:  241 GGTGDFKMGCNYGSSLLAQCEAAENGCHQVLWLYGKENR-ITEVGTMNLFLYWINKDGEEELATPPLDGVILPGVTRQSILELGEEWGEFKVCERHITMDDLSTALEENRVKEMFGSGTACVVCPVASILYKGQMLHIPTMENGHKLSSRIMAKLTDIQYGRI--KSEWTLEL 410          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_ECOLI (Branched-chain-amino-acid aminotransferase OS=Escherichia coli (strain K12) GN=ilvE PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  176 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV 634
            KA  NY   L     A+  G+ + + LD VN   + E +  N+F VK  V+ TP    + L GITR ++I++A++ G +V E+V+  + L  AD+VF +GTA  + PV S+      ++   G    V + +     G+ TG  EDK GW  +V
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALD-VNGY-ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV 307          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_ECOL6 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O6 GN=ilvE PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  176 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV 634
            KA  NY   L     A+  G+ + + LD VN   + E +  N+F VK  V+ TP    + L GITR ++I++A++ G +V E+V+  + L  AD+VF +GTA  + PV S+      ++   G    V + +     G+ TG  EDK GW  +V
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALD-VNGY-ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV 307          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_ECO57 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O157:H7 GN=ilvE PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  176 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGWTVEV 634
            KA  NY   L     A+  G+ + + LD VN   + E +  N+F VK  V+ TP    + L GITR ++I++A++ G +V E+V+  + L  AD+VF +GTA  + PV S+      ++   G    V + +     G+ TG  EDK GW  +V
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALD-VNGY-ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV 307          
The following BLAST results are available for this feature:
BLAST of CN189314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ILVE_HELPY4.916e-1834.59Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPJ4.916e-1833.96Branched-chain-amino-acid aminotransferase OS=Heli... [more]
BCAT_NEMVE2.697e-1634.30Branched-chain-amino-acid aminotransferase OS=Nema... [more]
ILVE_HAEIN3.523e-1636.53Branched-chain-amino-acid aminotransferase OS=Haem... [more]
BCAT_CAEEL3.523e-1634.62Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT_DICDI5.625e-1430.34Branched-chain-amino-acid aminotransferase OS=Dict... [more]
BCAT1_RAT9.594e-1432.95Branched-chain-amino-acid aminotransferase, cytoso... [more]
ILVE_ECOLI2.137e-1333.77Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECOL62.137e-1333.77Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECO572.137e-1333.77Branched-chain-amino-acid aminotransferase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189314 ID=CN189314; Name=CN189314; organism=Citrus sinensis; type=EST; length=665bp
TTTTTTTTTTTTTTTAATGTTCATATTTCTTTCATTTATTACCATCAGCT
TTGATGGGATTTAAAAATACATGGAAACTTTTTTTTTTACCTTACATAAT
ATGGGGCCAACAGCATTTTGTAACGACATTCTGTAAGTAAGCATAGCATT
ATTGGTGTTTAAACTTTGATTTTTAAACCTCCACAGTCCATCCTTTCTTA
TCCTCAATAACACCCGTTTGAATTCCTACGAGAGTTGAGTACAATTCCTG
ATACACCGAGCGTGACCCTGTTTTAAATTCAACTCTTTTATTTTGATATG
TGATACTGCCCACTGGAGCAACAACTACAGCGGTTCCAGTGCAAAATACT
TGGTCGGCATTGATCAGTTCGTCCACAGGAATAACACGTTCCTCAACCTG
ATAGCCATAATCCCTGGCAATTTCAATTACACTTCTTCTGGTAATCCCTT
CAAGAATAGTTCCATTTGTAGCGGGAGTTGAAATTACATTGCCCTTTACA
ACAAAAATGTTACAAGAAGAGACTTCCTCCACATTTTTCCTATTGACCGA
GTCAAGGTACAAGACATCCGAAAATCCTCTGCTCTTGGCTCGGATTAATG
CTTTCAGAACAGGAGCATAATTGCTGATTGCTTTTACCCCTCCAGCGCCG
CCGCAAAAATGAAAT
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