CN189314

Overview
NameCN189314
Unique NameCN189314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT1_MOUSE (Branched-chain-amino-acid aminotransferase, cytosolic OS=Mus musculus GN=Bcat1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = -2
Query:  176 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNV-----ISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT--GSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 652
            GG G  K   NY   L A   A   G   VL+L   + + + EV + N+F+   N      ++TP  +G IL G+TR+S++E+A+ +G ++V ER + +D+L  A       ++F +GTA VV PV  I Y+ + +   T      +   +   L  IQ G +E    WT+E+
Sbjct:  216 GGTGDCKMGGNYGASLLAQCEAVENGCQQVLWLYGKDNQ-ITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRQSILELAQQWGEFKVCERHLTMDDLATALEGNRVKEMFGSGTACVVCPVSDILYKGQMLHIPTMENGPKLASRILGKLTDIQYGRVE--SDWTIEL 385          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_SALTY (Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium GN=ilvE PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = -2
Query:  188 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGW 634
            KA  NY   L     A+  G+ + + LD VN   + E +  N+F VK  V+ TP    + L GITR ++I++A++ G +V E+V+  + L  AD+VF +GTA  + PV S+      ++   G    V + +     G+ TG  EDK GW
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALD-VNGY-ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_SALTI (Branched-chain-amino-acid aminotransferase OS=Salmonella typhi GN=ilvE PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = -2
Query:  188 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQELYSTLVGIQTGVIEDKKGW 634
            KA  NY   L     A+  G+ + + LD VN   + E +  N+F VK  V+ TP    + L GITR ++I++A++ G +V E+V+  + L  AD+VF +GTA  + PV S+      ++   G    V + +     G+ TG  EDK GW
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALD-VNGY-ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_RICBR (Probable branched-chain-amino-acid aminotransferase OS=Rickettsia bellii (strain RML369-C) GN=ilvE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = -2
Query:  227 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGS-RSVYQELYSTLV 634
            K+ ++Y   + +   AK  G+ D L LD      + E ++ NIF VK NV+ TP  +   L+GITR+++IEIA++ G +V+E  + ++++ +    F TGTA+ V  + SI   NK+V F       V +E Y  +V
Sbjct:  154 KSAAHYNMAITSKKEAKDLGYDDALLLDYEGY--IAECTTTNIFFVKDNVLYTPIAD-RFLDGITRQTIIEIAKNLGLEVKEERLKLEQIEDFISCFATGTAIEVQNINSIDIGNKKVIFNDHKIADVLKEEYGKIV 287          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT1_HUMAN (Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo sapiens GN=BCAT1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 4.761e-13
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = -2
Query:  182 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNV-----ISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT--GSRSVYQELYSTLVGIQTGVIEDKKGWTV 652
            GG G  K   NY   L A   A   G   VL+L   + + + EV + N+F+   N      ++TP  +G IL G+TRR ++++A  +G ++V ER + +D+L  A       ++F +GTA VV PV  I Y+ + +   T      +   + S L  IQ G   ++  WT+
Sbjct:  216 GGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQ-ITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYG--REESDWTI 383          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_RICFE (Probable branched-chain-amino-acid aminotransferase OS=Rickettsia felis GN=ilvE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = -2
Query:  275 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEF 634
            K+ + Y   + +   AK+ G+ D L LD      + E ++ NIF VK   + TP  +   L GITR+++IEIA+D G +V+E  + ++++ N    F TGTA+ V  + SI   NK++ F
Sbjct:  155 KSAAQYNMAITSKKEAKALGYDDALLLDYEGY--IAECTTTNIFFVKDKTLYTPIAD-RFLNGITRQTIIEIAKDLGLEVKEERLKLEQIENFTGCFVTGTAIEVQNIDSIDLGNKKITF 271          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_SYNY3 (Probable branched-chain-amino-acid aminotransferase OS=Synechocystis sp. (strain PCC 6803) GN=ilvE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12
Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = -2
Query:  176 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKT--GSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 634
            K  + Y     A   A   GF + + ++S  +  V E +  N+F+V+   I TP     ILEGITR S++ IA D G    +R I   EL+ AD+VF +GTA  + PV       KR+E  T  G R + ++L S L  +        + W  ++
Sbjct:  156 KISAAYITSALAKTEAVESGFDEAILMNSQGK--VCEATGMNVFMVRNGQIVTPGNEQDILEGITRDSILTIAADLGIPTCQRPIDKSELMIADEVFLSGTAAKITPV-------KRIENFTLGGDRPITEKLRSVLTAVTENREPKYQDWVFKI 301          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT2_MOUSE (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Mus musculus GN=Bcat2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = -2
Query:  269 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV---KGNVIS--TPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT 652
            GG G  K   NY P +     A+ RG   VL+L   + + + EV + NIFV    +  V+   TP  NG IL G+ R+S++++AR +G ++V ER + + EL  A       +VF +GTA  V PV  I Y+ K++   T
Sbjct:  224 GGVGDCKLGGNYGPTVAVQREAQKRGCEQVLWLYGPDHQ-LTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGRVREVFGSGTACQVCPVHQILYEGKQLHIPT 362          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_RICCN (Probable branched-chain-amino-acid aminotransferase OS=Rickettsia conorii GN=ilvE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 41/120 (34.17%), Postives = 69/120 (57.50%), Query Frame = -2
Query:  275 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEF 634
            K+ + Y   + +   AK+ G+ D L LD      + E ++ NIF VK  ++ TP  +   L GITR+++IEIA+D G +V+E  + ++++ +    F TGTA+ V  + SI   NK++ F
Sbjct:  155 KSAAQYNMAITSKKEAKALGYEDALLLDYEGY--IAECTTTNIFFVKDKILYTPIAD-RFLNGITRQTIIEIAKDLGLEVKEERLKLEQIEDFTGCFVTGTAIEVQNIDSIDLGNKKIIF 271          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT_MONBE (Branched-chain-amino-acid aminotransferase OS=Monosiga brevicollis GN=37018 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 51/165 (30.91%), Postives = 87/165 (52.73%), Query Frame = -2
Query:  203 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNV-----ISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITY--QNKRVEFKTG-SRSVYQELYSTLVGIQTGVIE 652
            GG G  K   NYAP +    +A+++G   VL+L   + + V EV + N+F+   N      + TP  +GTIL G+TR+S++++AR +  ++V ER   + ++  A       ++F  GTA  V P+G I Y  ++  V    G S  +   +++ +  IQ G +E
Sbjct:  219 GGVGNTKGGCNYAPSIYPQSQAQAQGCQQVLWLFGEDHE-VTEVGTMNLFMYWKNEQGEDELITPPLDGTILPGVTRQSIVDMARGWNEFKVSERKFNMGQVSRALKEGRVYEMFGAGTAATVCPIGQIKYLGEDLNVPLALGNSGELTNRIWTDIFDIQYGAVE 382          
The following BLAST results are available for this feature:
BLAST of CN189314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
BCAT1_MOUSE2.137e-1331.79Branched-chain-amino-acid aminotransferase, cytoso... [more]
ILVE_SALTY3.646e-1334.00Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_SALTI3.646e-1334.00Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_RICBR3.646e-1334.31Probable branched-chain-amino-acid aminotransferas... [more]
BCAT1_HUMAN4.761e-1330.99Branched-chain-amino-acid aminotransferase, cytoso... [more]
ILVE_RICFE1.385e-1235.00Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_SYNY32.363e-1232.26Probable branched-chain-amino-acid aminotransferas... [more]
BCAT2_MOUSE2.363e-1235.71Branched-chain-amino-acid aminotransferase, mitoch... [more]
ILVE_RICCN4.031e-1234.17Probable branched-chain-amino-acid aminotransferas... [more]
BCAT_MONBE4.031e-1230.91Branched-chain-amino-acid aminotransferase OS=Mono... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189314 ID=CN189314; Name=CN189314; organism=Citrus sinensis; type=EST; length=665bp
TTTTTTTTTTTTTTTAATGTTCATATTTCTTTCATTTATTACCATCAGCT
TTGATGGGATTTAAAAATACATGGAAACTTTTTTTTTTACCTTACATAAT
ATGGGGCCAACAGCATTTTGTAACGACATTCTGTAAGTAAGCATAGCATT
ATTGGTGTTTAAACTTTGATTTTTAAACCTCCACAGTCCATCCTTTCTTA
TCCTCAATAACACCCGTTTGAATTCCTACGAGAGTTGAGTACAATTCCTG
ATACACCGAGCGTGACCCTGTTTTAAATTCAACTCTTTTATTTTGATATG
TGATACTGCCCACTGGAGCAACAACTACAGCGGTTCCAGTGCAAAATACT
TGGTCGGCATTGATCAGTTCGTCCACAGGAATAACACGTTCCTCAACCTG
ATAGCCATAATCCCTGGCAATTTCAATTACACTTCTTCTGGTAATCCCTT
CAAGAATAGTTCCATTTGTAGCGGGAGTTGAAATTACATTGCCCTTTACA
ACAAAAATGTTACAAGAAGAGACTTCCTCCACATTTTTCCTATTGACCGA
GTCAAGGTACAAGACATCCGAAAATCCTCTGCTCTTGGCTCGGATTAATG
CTTTCAGAACAGGAGCATAATTGCTGATTGCTTTTACCCCTCCAGCGCCG
CCGCAAAAATGAAAT
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