CN189314

Overview
NameCN189314
Unique NameCN189314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_METJA (Putative branched-chain-amino-acid aminotransferase OS=Methanocaldococcus jannaschii GN=ilvE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = -2
Query:  281 NYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSI---TYQNKRV 622
            NY   + A I+A   G  +   LD  ++  V E +  NIF+VK  V+ TP    +IL+GITR  VI++A++ G +V E  + + +L  AD++F TGTA  + PV  I      NK+V
Sbjct:  149 NYLNSVLAKIQANYAGVDEAFLLD--DKGFVVEGTGDNIFIVKNGVLKTPPVYQSILKGITRDVVIKLAKEEGIEVVEEPLTLHDLYTADELFITGTAAEIVPVFEIDGRVINNKQV 263          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT1_SHEEP (Branched-chain-amino-acid aminotransferase, cytosolic OS=Ovis aries GN=BCAT1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 51/173 (29.48%), Postives = 84/173 (48.55%), Query Frame = -2
Query:  176 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN-----VISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT--GSRSVYQELYSTLVGIQTGVIEDKKGWTVEV 652
            GG G  K   NY   L A   A       VL+L       + EV + N+F+   N      ++TP  +G IL G+ R+S++++A  +G ++V ER + +D+L  A       ++F +GTA VV PV +I Y+++ +   T      +   +   L  IQ G   ++  WT+ V
Sbjct:  215 GGTGDCKMGGNYGSSLFAQCEAVENACQQVLWLYG-EENQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVMRQSILDLAHKWGEFKVSERYLTMDDLTTAVEENRVREMFGSGTACVVCPVSTILYKDETIHIPTMENGPKLASRILEKLTDIQYG--REESDWTITV 384          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCA1_YEAST (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=BAT1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  281 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVIS------TPATNGTILEGITRRSVIEIARD----YGYQVEERVIPVDELINAD------QVFCTGTAVVVAPVGSITYQNKRV 652
            GG G  K  +NYAP +   ++A  RG+   L+L     KN+ EV + N+F V  N ++      T   +GTILEG+TR SV+ +ARD      + + ER   + E+          + F +GTA VV+P+  I + N+ +
Sbjct:  213 GGVGDKKLGANYAPCILPQLQAAKRGYQQNLWLFGPE-KNITEVGTMNVFFVFLNKVTGKKELVTAPLDGTILEGVTRDSVLTLARDKLDPQEWDINERYYTITEVATRAKQGELLEAFGSGTAAVVSPIKEIGWNNEDI 351          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_METTH (Putative branched-chain-amino-acid aminotransferase OS=Methanobacterium thermoautotrophicum GN=ilvE PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = -2
Query:  188 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRS-VYQELYSTLVGIQTGVIEDKKGW 634
            KA  NY     A + A   G+ + + LD      + E S  NIF+V    I TP  + ++L GITR SVI+IAR  G  V E  I  + L  AD+ F TGTA  + P+ S+      +E   G R  V + L      I     ED  GW
Sbjct:  159 KAGGNYLNSQLAKMEAVRHGYDEAIMLDY--HGYISEGSGENIFLVSEGEIYTPPVSSSLLRGITRDSVIKIARTEGVTVHEEPITREMLYIADEAFFTGTAAEITPIRSV----DGIEIGAGRRGPVTKLLQDEFFRIIRAETEDSFGW 302          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT2_RAT (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus GN=Bcat2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = -2
Query:  269 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV----KGNV-ISTPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT 652
            GG G  K   NY P +     A+ +G   VL+L   + + + EV + NIFV      G + ++TP  +G IL G+ R+S++++AR +G ++V ER + + EL  A       +VF +GTA  V PV  I Y+ K++   T
Sbjct:  224 GGVGDCKLGGNYGPTVAVQQEAQKKGCEQVLWLYGPDHQ-LTEVGTMNIFVYWTHEDGELELATPPLDGIILPGVVRQSLLDLARTWGEFRVAERKVTMKELKRALEEGRVREVFGSGTACQVCPVHQILYEGKQLHIPT 362          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: ILVE_ARCFU (Putative branched-chain-amino-acid aminotransferase OS=Archaeoglobus fulgidus GN=ilvE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = -2
Query:  311 NYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPV 622
            NY   + A I A ++G  + ++LD      V E S  NIFVVK   I+TP T    L GITR +VIEI    G   +E  I + +L  AD+VF TGTA  +AP+
Sbjct:  153 NYLNNILAKIEANAKGGDEAIFLD--RNGYVSEGSGDNIFVVKNGAITTPPTINN-LRGITREAVIEIINRLGIPFKETNIGLYDLYTADEVFVTGTAAEIAPI 253          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT2_BOVIN (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Bos taurus GN=BCAT2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  269 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV---KGNVIS--TPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT 652
            GG G  K   NY P +     A+ +G   VL+L   + + + EV + NIFV    +  V+   TP  +G IL GI R+S++++AR +G ++V ER I + E + A       +VF +GTA  V PV  I YQ K     T
Sbjct:  224 GGVGNYKLGGNYGPTVLVQQEAQKKGCEQVLWLYGPDHE-LTEVGTMNIFVFWTYEDGVLELVTPPLDGIILPGIVRQSLLDLARTWGEFRVVERKITMKEFLRALKDGRVREVFGSGTACQVCPVHQILYQGKHFHIPT 362          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: BCAT2_HUMAN (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Homo sapiens GN=BCAT2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = -2
Query:  269 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV---KGNVIS--TPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKT 652
            GG G  K   NY P +     A  RG   VL+L   + + + EV + NIFV    +  V+   TP  NG IL G+ R+S++++A+ +G ++V ER I + +L+ A       +VF +GTA  V PV  I Y+++ +   T
Sbjct:  223 GGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQ-LTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPT 361          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: DAAA_BACLI (D-alanine aminotransferase OS=Bacillus licheniformis GN=dat PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = -2
Query:  293 KSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQ 586
            ++  F  +L  D +    V E +S N++V K NVI T      IL GITR  V+++  + G   EE+ +  DEL+NAD+VF T T   V PV SI  Q
Sbjct:  160 EASAFEAILIRDGL----VTEGTSSNVYVAKQNVIYTHPVTTLILNGITRMKVLQLCEENGLNYEEKAVTKDELLNADEVFITSTTAEVIPVTSIDGQ 253          
BLAST of CN189314 vs. ExPASy Swiss-Prot
Match: TOXF_COCCA (Putative branched-chain-amino-acid aminotransferase TOXF OS=Cochliobolus carbonum GN=TOXF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 51/175 (29.14%), Postives = 85/175 (48.57%), Query Frame = -2
Query:  161 GAGGVKAISNYAPVLKALIRAKSR---GFSDVLYLDSVNRKNVEEVSSCNIFVVK-------GNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQ--NKRVEFKTGSRSVYQELYSTLVGIQTGVIEDKKGWTVEV*KSKF 649
            G G VK   NYAPV++    AK     G+  +L++DS  +  ++E S+      K          I  P +   I + IT  SV  +A+ +G+ + ++ + +DEL +  +V   GTA  + PV  I +   N+  EF +    +Y++L  TL  IQ G   D  GW  ++  ++F
Sbjct:  183 GTGHVKIGGNYAPVIRWTQSAKKEENGGWDVLLHVDSKTQTRIDEFSTSAFIGTKYAEEQNEPPQIILPESAAAI-QSITSDSVAWLAKSFGWNIVKQPVTIDELASLSEVMAVGTAAGLVPVSCIRHNSTNRTFEFPSAG-PMYRQLKETLDNIQRGRSSDSFGWCEKLRYAEF 355          
The following BLAST results are available for this feature:
BLAST of CN189314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ILVE_METJA6.875e-1237.61Putative branched-chain-amino-acid aminotransferas... [more]
BCAT1_SHEEP8.980e-1229.48Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCA1_YEAST8.980e-1233.57Branched-chain-amino-acid aminotransferase, mitoch... [more]
ILVE_METTH1.173e-1135.33Putative branched-chain-amino-acid aminotransferas... [more]
BCAT2_RAT1.173e-1134.29Branched-chain-amino-acid aminotransferase, mitoch... [more]
ILVE_ARCFU1.532e-1142.31Putative branched-chain-amino-acid aminotransferas... [more]
BCAT2_BOVIN1.532e-1135.71Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT2_HUMAN2.613e-1134.29Branched-chain-amino-acid aminotransferase, mitoch... [more]
DAAA_BACLI3.412e-1139.80D-alanine aminotransferase OS=Bacillus licheniform... [more]
TOXF_COCCA4.457e-1129.14Putative branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189314 ID=CN189314; Name=CN189314; organism=Citrus sinensis; type=EST; length=665bp
TTTTTTTTTTTTTTTAATGTTCATATTTCTTTCATTTATTACCATCAGCT
TTGATGGGATTTAAAAATACATGGAAACTTTTTTTTTTACCTTACATAAT
ATGGGGCCAACAGCATTTTGTAACGACATTCTGTAAGTAAGCATAGCATT
ATTGGTGTTTAAACTTTGATTTTTAAACCTCCACAGTCCATCCTTTCTTA
TCCTCAATAACACCCGTTTGAATTCCTACGAGAGTTGAGTACAATTCCTG
ATACACCGAGCGTGACCCTGTTTTAAATTCAACTCTTTTATTTTGATATG
TGATACTGCCCACTGGAGCAACAACTACAGCGGTTCCAGTGCAAAATACT
TGGTCGGCATTGATCAGTTCGTCCACAGGAATAACACGTTCCTCAACCTG
ATAGCCATAATCCCTGGCAATTTCAATTACACTTCTTCTGGTAATCCCTT
CAAGAATAGTTCCATTTGTAGCGGGAGTTGAAATTACATTGCCCTTTACA
ACAAAAATGTTACAAGAAGAGACTTCCTCCACATTTTTCCTATTGACCGA
GTCAAGGTACAAGACATCCGAAAATCCTCTGCTCTTGGCTCGGATTAATG
CTTTCAGAACAGGAGCATAATTGCTGATTGCTTTTACCCCTCCAGCGCCG
CCGCAAAAATGAAAT
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