CX286960

Overview
NameCX286960
Unique NameCX286960
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length577
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.578e-53
Identity = 97/145 (66.90%), Postives = 117/145 (80.69%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMIVQGFALI 440
            +GARK GVTSLPP GC PAAR LFG H +GCVSR+N  AQ FNKK+N++AS LQKQ   LKIV+FDI+ PL++LVQ+PSK GF EAT+ CCGTGT + T  LCN KS  TC NA+QYVFWDSVHPSEAAN+++A  +I QGF+L+
Sbjct:  208 VGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAASKLQKQYSDLKIVVFDIYSPLYDLVQNPSKSGFTEATKGCCGTGTVETTSLLCNPKSFGTCSNATQYVFWDSVHPSEAANEILATALIGQGFSLL 352          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.134e-43
Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 3
Query:    3 GLGARKFGVTSLPPLGCFPAARILFGNHGRG-CVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMIVQGFALI 440
            GLGAR+ GVT+LPPLGC PAA  LFG  G   CV R+N  A  FN K+N+++ NL   LPGLK+V+FDI+ PL  +V +P ++GF E+ R+CCGTGT + T FLCN  S  TC NA+ YVFWD  HPSEAAN+VIA+ ++VQG  LI
Sbjct:  207 GLGARRIGVTTLPPLGCLPAAITLFGGVGNNMCVERLNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRACCGTGTME-TSFLCNALSVGTCSNATNYVFWDGFHPSEAANRVIANNLLVQGIPLI 352          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.298e-43
Identity = 84/147 (57.14%), Postives = 105/147 (71.43%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNHGRG--CVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMIVQGFALI 440
            LGARK GVT+LPPLGC PAA  LFG  G    CV R+N  A  FN K+N+++ NL   LPGLK+V+FDI+ PL  +  +P + GF E+ R+CCGTGT + T FLCN +S  TC NA+ YVFWD  HPSEAAN+VIA+ ++VQG  LI
Sbjct:  208 LGARKIGVTTLPPLGCLPAAITLFGETGNNNTCVERLNQDAVSFNTKLNNTSMNLTNNLPGLKLVVFDIYNPLLNMAMNPVENGFFESRRACCGTGTVE-TSFLCNARSVGTCSNATNYVFWDGFHPSEAANRVIANNLLVQGIPLI 353          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.637e-42
Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMIVQGFALI 440
            LGAR+ GVT+LPPLGC PAA  + G H  GC  ++N  A  FN K+N+++ +L++ L GL +V+FDI++PL++L   PS+FGF EA R+CCGTG  + T  LCN KS  TC NA++YVFWD  HP+EAANK++AD ++V G +LI
Sbjct:  201 LGARRIGVTTLPPLGCLPAAITVVGPHEGGCSEKLNNDAISFNNKLNTTSQDLKRNLIGLNLVVFDIYQPLYDLATRPSEFGFAEARRACCGTGLLE-TSILCNPKSVGTCNNATEYVFWDGFHPTEAANKILADNLLVSGISLI 344          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.317e-35
Identity = 68/145 (46.90%), Postives = 98/145 (67.59%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMIVQGFALI 440
            LGAR+ GV SLPP+GC PAA  LFG   + CV R+N  A  FN K+ ++   L  +  GL++V F++++P  +++ +P+  GF E  R+CCGTGT + T FLCN  S  TC NA+ YVFWD  HP+EA N+++A +++ QG +LI
Sbjct:  207 LGARRIGVISLPPMGCLPAAITLFGAGNKSCVERLNNDAIMFNTKLENTTRLLMNRHSGLRLVAFNVYQPFLDIITNPTDNGFFETKRACCGTGTIE-TSFLCNSLSFGTCVNATGYVFWDGFHPTEAVNELLAGQLLGQGISLI 350          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.877e-30
Identity = 59/139 (42.45%), Postives = 91/139 (65.47%), Query Frame = 3
Query:    3 GLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMI 419
            GLGAR+ GV S  P+GC PAAR L G   R C  ++N  A+ FN K++ +   L K+LP  ++V+ D+   L +++++P  +GF  + R CCGTG  +  +FLCN+ +  TC N+S Y+FWDS HP+E A ++I D+++
Sbjct:  224 GLGARRIGVFSAVPVGCVPAARTLRGKLKRRCSEKLNEVARNFNAKISPTLEALGKELPDSRVVLIDVCDTLNDMIENPKNYGFEVSNRGCCGTGLVE-VLFLCNKINPFTCKNSSSYIFWDSYHPTEKAYQIIVDKLL 361          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.030e-28
Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 3
Query:    3 GLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMI 419
            G G R+  V   PP+GC P+ R L G   R C    N AA+ FN K++    +L+K LPG+K +  +I+ PLF+++Q+P+ +GF  + + CCGTG  +  V LCN+ ++  CP+ S +VFWDS HP+E   KV+   +I
Sbjct:  219 GYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTGAIEVAV-LCNKITSSVCPDVSTHVFWDSYHPTEKTYKVLVSLLI 356          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.719e-28
Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNH-GRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMI 419
            LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+GF  A R CCG G    + +LCN  +  TC N+S Y+FWDS HPSE A +VI D ++
Sbjct:  205 LGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAIS-YLCNSLNPFTCSNSSAYIFWDSYHPSERAYQVIVDNLL 341          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 8.719e-28
Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 3
Query:    6 LGARKFGVTSLPPLGCFPAARILFGNH-GRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMI 419
            LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+GF  A R CCG G    + +LCN  +  TC N+S Y+FWDS HPSE A +VI D ++
Sbjct:  205 LGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAIS-YLCNSLNPFTCSNSSAYIFWDSYHPSERAYQVIVDNLL 341          
BLAST of CX286960 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.139e-27
Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 3
Query:    3 GLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSCCGTGTTKRTVFLCNQKSARTCPNASQYVFWDSVHPSEAANKVIADEMI 419
            G GAR+  V   PP+GC P+ R + G   R CV+R N AA+ FN K++++   L + L    I+  DI+ PL +L+ +P ++GF  A + CCGTG  + T  LCN  +A  CP  S YVFWDS HP+E A ++I  +++
Sbjct:  230 GYGARRILVFGAPPIGCVPSQRTVAGGPTRDCVARFNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTGLIEVTA-LCNNYTASVCPIRSDYVFWDSFHPTEKAYRIIVAKLL 367          
The following BLAST results are available for this feature:
BLAST of CX286960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
APG2_ARATH1.578e-5366.90GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL72_ARATH1.134e-4357.82GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL73_ARATH3.298e-4357.14GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL78_ARATH1.637e-4253.79GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL59_ARATH4.317e-3546.90GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL90_ARATH1.877e-3042.45GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
EXL3_ARATH1.030e-2841.01GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL26_ARATH8.719e-2843.88GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH8.719e-2843.88GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
EXL1_ARATH1.139e-2741.73GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC01003A06SK Veg1 Citrus clementina cDNA clone C01003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286960 ID=CX286960; Name=CX286960; organism=Citrus clementina; type=EST; length=577bp
ATGGATTGGGAGCAAGGAAATTTGGAGTCACTTCATTGCCACCGCTGGGT
TGCTTTCCCGCAGCAAGAATTTTATTCGGTAATCATGGAAGGGGCTGTGT
CTCTAGAATCAATATTGCTGCTCAACAATTTAATAAGAAGGTCAACTCTT
CAGCATCAAATCTCCAAAAGCAACTTCCTGGTCTGAAAATTGTGATTTTC
GACATTTTCAAGCCACTCTTTGAACTTGTCCAGTCCCCTTCAAAATTTGG
CTTCGTGGAAGCAACAAGAAGTTGCTGTGGAACAGGAACTACAAAGAGAA
CTGTATTTCTGTGCAATCAAAAGTCAGCTAGAACATGCCCCAATGCCTCC
CAGTATGTGTTCTGGGACAGTGTTCATCCTTCTGAGGCTGCTAATAAGGT
TATTGCCGACGAAATGATTGTTCAAGGATTTGCCCTTATCTGAAGAGGAT
ATCTAGTCCACAAATATGACCAACATTTCTGTTCAGGTTTCTTCACCCTC
TAGGTATCTGGGCCTCAGATTATCTATTTGTTCGTTTTTCATTTCAAAAA
AAAAAAAAAAAAAAGGGGGGGCCCGGT
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