CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PROMS (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain AS9601) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 71/121 (58.68%), Postives = 82/121 (67.77%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD+ V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 132
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PROM5 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9515) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 70/121 (57.85%), Postives = 82/121 (67.77%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G+ IN R +YL NP L +K PL TLG E SYD+FV GGGL+GQA AI G ARAL +S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPSHLNSVKAPLQTLGLENSYDIFVNVFGGGLTGQADAIKQGAARALCDLSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 132
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RR9_GRATL (30S ribosomal protein S9, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rps9 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK +IARV L G+GK IIN + YLQ +P +L+ PL LG YD++VK GGGL+GQA AI LG+ARAL +++ D+R+ LK EG LTRD+R+ ERKK GL KARKAPQ Sbjct: 14 GTGRRKTSIARVKLVPGSGKLIINGLPGESYLQFSPNYLRVSYSPLKILGLNKEYDIYVKTEGGGLTGQANAIRLGLARALCRMNPDNRTTLKAEGFLTRDARIKERKKYGLRKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PROMM (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9313) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.700e-30 Identity = 69/121 (57.02%), Postives = 81/121 (66.94%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G+G IN R YL NP +L +K PL TLG YDV V HGGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 11 WGTGRRKTSVARVRLVPGSGTITINGRPGDHYLNFNPAYLAAVKAPLQTLGLNEQYDVLVNVHGGGLTGQADAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 131
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PROM0 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpsI PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.700e-30 Identity = 71/121 (58.68%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD++V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRAGDDYLNFNPLHLNSIKAPLQTLGLENSYDMYVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 132
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PROMA (30S ribosomal protein S9 OS=Prochlorococcus marinus GN=rpsI PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.220e-30 Identity = 70/125 (56.00%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 248 AQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 A +GTGRRK ++ARV L GTGK IN R YL NP +L +K PL TLG +YDV V +GGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 8 AVVYWGTGRRKTSVARVRLIPGTGKITINGRPGDHYLNFNPAYLSAVKAPLHTLGLGEAYDVLVNVYGGGLTGQSDAIKQGAARALCELSVDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 132
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_SYNS9 (30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9902) GN=rpsI PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.899e-30 Identity = 68/121 (56.20%), Postives = 81/121 (66.94%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YDV V HGGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLSTEYDVLVNVHGGGLTGQSGAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 129
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_SYNS3 (30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9311) GN=rpsI PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30 Identity = 69/121 (57.02%), Postives = 80/121 (66.12%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G IN R YL NP +L +K PL TLG T YDV V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 11 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYLAAVKAPLQTLGLSTEYDVLVNVRGGGLTGQADAIKQGAARALCELSVDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 131
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ACAM1 (30S ribosomal protein S9 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsI PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30 Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK +I RV L G+G IN + YLQ NP ++ K PL +LG E YDV V A GGGL+GQA AI LGVARAL ++ ++R PLK EG LTRD R ERKK GL KARKAPQ Sbjct: 14 GTGRRKSSIVRVRLVPGSGVMTINGKPGDLYLQFNPSYIANAKAPLESLGLENDYDVLVNARGGGLTGQADAIKLGVARALCELDPENRKPLKLEGYLTRDPRAKERKKYGLRKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_SYNPX (30S ribosomal protein S9 OS=Synechococcus sp. (strain WH8102) GN=rpsI PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30 Identity = 67/121 (55.37%), Postives = 81/121 (66.94%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YD+ V HGGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLGTEYDILVNVHGGGLTGQSGAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQ 129 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |