CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RR9_ARATH (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.426e-69 Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 2 Query: 203 DLKKYVKSRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +LKKYVKSRLPGGFAAQ I GTGRRKCAIARVVLQEGTGK IINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+FVKAHGGGLSGQAQAITLGVARALLKVS DHRSPLKKEGLLTRD+RVVERKKAGL KARKAPQ Sbjct: 65 ELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQ 204
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RR9_SPIOL (30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.271e-67 Identity = 124/140 (88.57%), Postives = 133/140 (95.00%), Query Frame = 2 Query: 203 DLKKYVKSRLPGGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 DL+K+VKSRLPGGFAAQT+ GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQY+K PL TLGYET+YDVFVKAHGGGLSGQAQAI+LGVARALLKVS HR+PLK+EGLLTRDSR+VERKK GL KARKAPQ Sbjct: 54 DLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQ 193
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_NOSP7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpsI PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.534e-34 Identity = 74/121 (61.16%), Postives = 87/121 (71.90%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L GTG+ +N +D Y Q NP +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ D+R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 14 WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQ 134
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_THEEB (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.645e-34 Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L G+G+ IN R+ +YLQ NP++L +K PL TLG E SYD++V A GGGL+GQA AI LG+ARAL ++ ++R PLK EG LTRD R ER+K GL KARKAPQ Sbjct: 14 GTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVNATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_SYNP2 (30S ribosomal protein S9 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsI PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.373e-34 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK +IARV L G+GK ++N R ++Y P +L +K PL TLG E+ YD+ V AHGGGL+GQA A+ LGVARAL ++ D+R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 13 WGTGRRKASIARVRLVPGSGKVVVNNRSGEDYFNRIPGYLAVLKSPLETLGLESEYDILVNAHGGGLTGQADAVKLGVARALCELDPDNRQPLKIEGYLTRDPRCKERKKYGLHKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_SYNJA (30S ribosomal protein S9 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.779e-33 Identity = 75/121 (61.98%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L GTGK IIN R +YLQ L +K PL LG E SYD+ V+AHGGG+ GQA AI LGVARAL +V +R PLK EG L RD R VERKK GL KARKAPQ Sbjct: 13 WGTGRRKTAVARVRLVPGTGKLIINDRPGDQYLQYQEALLASVKAPLELLGLENSYDILVRAHGGGVHGQADAIKLGVARALCEVDPANRGPLKTEGYLKRDPRAVERKKYGLRKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_MICAN (30S ribosomal protein S9 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.779e-33 Identity = 71/121 (58.68%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+A V L GTG +N RD + + P ++Q IK PL TLG E YD+ VKA GGGL+GQA A+ LGVARAL +++ ++R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 13 WGTGRRKSAVAAVRLVPGTGAITVNGRDGETHFNRIPTYIQTIKAPLETLGLENEYDIIVKAEGGGLTGQADAVKLGVARALCQLAPENRPPLKSEGYLTRDPRAKERKKYGLHKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_CYAA5 (30S ribosomal protein S9 OS=Cyanothece sp. (strain ATCC 51142) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.779e-33 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L G+G+ I+N + Y P +LQ IK PL TLG E YD+ V AHGGGL+GQA A+ LGVARAL +++ ++R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 13 WGTGRRKSAVARVRLVPGSGEIIVNKKPGNIYFNRIPDYLQAIKGPLETLGLENDYDILVNAHGGGLTGQADAVKLGVARALCELAPENRPPLKAEGYLTRDPRAKERKKYGLHKARKAPQ 133
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ANAVT (30S ribosomal protein S9 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.151e-33 Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ ++R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQ 134
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ANASP (30S ribosomal protein S9 OS=Anabaena sp. (strain PCC 7120) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.151e-33 Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L GTG+ I+N + Y Q N +L IK PL TLG E YD+ VKA GGGL+GQA ++ LGVARAL ++ ++R PLK EG LTRD R ERKK GLHKARKAPQ Sbjct: 14 WGTGRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLENEYDILVKAEGGGLTGQADSVRLGVARALCQLDPENRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQ 134 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |