CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_MYCH7 (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rpsI PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.347e-27 Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V AHGGG+SGQA AI LG+ARALLKVS D+R LK G+LTRD+R ERKK GL KAR+A Q Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRARQ 128
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_MYCH2 (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 232) GN=rpsI PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.347e-27 Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L ++ PL + +++ V AHGGG+SGQA AI LG+ARALLKVS D+R LK G+LTRD+R ERKK GL KAR+A Q Sbjct: 9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRARQ 128
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRU0 (30S ribosomal protein S9 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rpsI PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.297e-27 Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV +GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNSKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_PETMO (30S ribosomal protein S9 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpsI PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.297e-27 Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIIN---YRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L+ G GK IN Y+ EYL+GN +W PL +D+ ++ +GGGLSGQA AI LG+ARALL + R LKKEGLLTRD R VERKK GL KARK Q Sbjct: 8 YGTGRRKTAVARVHLRPGNGKIKINGKEYKSLVEYLRGNEVWEIEALKPLTVTSTNGQFDLVIRVNGGGLSGQAGAIRLGIARALLSYDESFRPILKKEGLLTRDPREVERKKYGLRKARKRAQ 131
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_GEOTN (30S ribosomal protein S9 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsI PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.297e-27 Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G+ I+N D +EY+ L ++ +K PLV SYDV V HGGG +GQA AI G+ARALL+V + R+ LK+ GLLTRD+RV ERKK GL AR+APQ Sbjct: 7 YGTGRRKSSVARVRLVPGDGRIIVNKHDIREYIPSEAL-IEMVKQPLVLTETLGSYDVLVNVHGGGFAGQAGAIRHGIARALLEVDPEFRAVLKRAGLLTRDARVKERKKYGLKGARRAPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BACST (30S ribosomal protein S9 OS=Bacillus stearothermophilus GN=rpsI PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.000e-27 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G+ I+N +D +EY+ L ++ +K PLV SYDV V HGGG +GQA AI G+ARALL+V + R+ LK+ GLLTRD+RV ERKK GL AR+APQ Sbjct: 7 YGTGRRKSSVARVRLVPGDGRIIVNKQDIREYIPTEAL-IEMVKQPLVLTETLGSYDVLVNVHGGGFAGQAGAIRHGIARALLQVDPEFRTVLKRAGLLTRDARVKERKKYGLKGARRAPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BIFAA (30S ribosomal protein S9 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rpsI PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.918e-27 Identity = 69/122 (56.56%), Postives = 84/122 (68.85%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK A+ARV L GTGK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ Sbjct: 39 YGTGRRKEAVARVRLVPGTGKWTINGRTLEEYFPAKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQ 159
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRS7 (30S ribosomal protein S9 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpsI PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27 Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG +GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRS2 (30S ribosomal protein S9 OS=Streptococcus suis (strain 98HAH33) GN=rpsI PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P + SYDVFV +GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRMU (30S ribosomal protein S9 OS=Streptococcus mutans GN=rpsI PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27 Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG +GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLEVDPDFRDALKRAGLLTRDARMVERKKPGLKKARKASQ 126 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |