CX286967

Overview
NameCX286967
Unique NameCX286967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length623
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STREM (30S ribosomal protein S9 OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRE4 (30S ribosomal protein S9 OS=Streptococcus equi subsp. equi (strain 4047) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_GEOSW (30S ribosomal protein S9 OS=Geobacillus sp. (strain WCH70) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 2 
Query:  260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            +GTGRRK ++ARV L  G G+ +IN RD ++Y+    L ++ +K PLV      +YDV V   GGG SGQA AI  G+ARALL+V  D+R  LK+ GLLTRD+RV ERKK GL  AR+APQ
Sbjct:    7 YGTGRRKSSVARVRLVPGDGRIVINDRDIRDYIPSEAL-IEVVKQPLVLTETLGNYDVLVNVKGGGFSGQAGAIRHGIARALLQVDPDYRPVLKRAGLLTRDARVKERKKYGLKGARRAPQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPZ (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPM (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M28 GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPG (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPF (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPD (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPC (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
[Close]
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRPB (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rpsI PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 68/120 (56.67%), Postives = 79/120 (65.83%), Query Frame = 2 
Query:  263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL+V  D R  LK+ GLLTRD+R+VERKK GL KARKA Q
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RS9_STREM5.117e-2756.6730S ribosomal protein S9 OS=Streptococcus equi sub... [more]
RS9_STRE45.117e-2756.6730S ribosomal protein S9 OS=Streptococcus equi sub... [more]
RS9_GEOSW5.117e-2753.7230S ribosomal protein S9 OS=Geobacillus sp. (strai... [more]
RS9_STRPZ6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPM6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPG6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPF6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPD6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPC6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]
RS9_STRPB6.684e-2756.6730S ribosomal protein S9 OS=Streptococcus pyogenes... [more]

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Properties
Property NameValue
Genbank descriptionC01003B02SK Veg1 Citrus clementina cDNA clone C01003B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bp
AATGGCAATGTCACCCGCAATATCTCCTCTCACATCTTCCCTCTCTTCCC
TTTCATTTTCCTCCCAAATTTCTCAGAAACCAGGCATCCCCTTTGTCTCA
TTACACAGGTCCAAATCGATATCCATCTCTCCAAAAAATGATAAAACCCC
AAAACTGGTAGTATCGGCCACAGAAGCTGCGCCAGCTGAACTGGAAACAA
CTGACCTCAAGAAATACGTCAAATCGAGGCTTCCCGGTGGCTTTGCGGCT
CAAACTATTTTTGGAACGGGCCGTCGGAAATGCGCCATTGCTCGTGTCGT
CCTCCAAGAAGGCACCGGCAAATTCATCATCAACTACCGCGATGCCAAGG
AATATCTTCAAGGCAATCCACTATGGCTACAGTATATAAAAGTCCCTTTG
GTAACTTTGGGTTATGAAACTAGCTATGATGTTTTTGTGAAAGCTCATGG
TGGCGGCCTCTCTGGTCAAGCTCAAGCAATAACACTCGGCGTTGCTCGTG
CATTGTTGAAGGTGAGCCAGGACCATAGATCCCCTCTGAAAAAGGAAGGC
CTTCTGACCAGAGATTCCAGAGTAGTAGAGAGGAAAAAAGCTGGACTCCA
TAAAGCCCGGAAAGCCCCACAAT
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