CX286967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BIFLI (30S ribosomal protein S9 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 2 Query: 236 GGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 G A + +GTGRRK A+ARV L G GK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ Sbjct: 31 GTSAIEPGYGTGRRKEAVARVRLVPGDGKWTINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQ 159
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BIFLD (30S ribosomal protein S9 OS=Bifidobacterium longum (strain DJO10A) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 2 Query: 236 GGFAAQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 G A + +GTGRRK A+ARV L G GK+ IN R +EY L + + P+V L E +D V GGG +GQA AI LGVARAL + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+APQ Sbjct: 31 GTSAIEPGYGTGRRKEAVARVRLVPGDGKWTINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQ 159
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_BACA2 (30S ribosomal protein S9 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G+ ++N R+ E++ +P ++ IK PL +YDV V HGGGLSGQA AI G+ARALL+ ++R+ LK+ GLLTRD+R+ ERKK GL AR+APQ Sbjct: 7 YGTGRRKSSVARVRLVPGEGRIVVNNREISEHIP-SPALIEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRATLKRAGLLTRDARMKERKKYGLKGARRAPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_ANOFW (30S ribosomal protein S9 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26 Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 260 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 +GTGRRK ++ARV L G G+ I+N RD ++Y+ L ++ +K PLV SYDV V GGG +GQA AI G+ARALL+V ++R LK+ GLLTRDSRV ERKK GL AR+APQ Sbjct: 7 YGTGRRKSSVARVRLVPGEGRIIVNGRDIRDYVPYESL-VEVVKQPLVLTETFGSYDVLVNVSGGGFTGQAGAIRHGIARALLQVDPEYRQTLKRAGLLTRDSRVKERKKYGLKGARRAPQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_TROWT (30S ribosomal protein S9 OS=Tropheryma whipplei (strain Twist) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 69/121 (57.02%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVS-QDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 G GRRK A ARV L G G F++N RD EY L Q+ PL L SYDV V HGGG SGQA A+ LG+ARAL + +++R PLK G LTRDSRV ERKKAGL KARKAPQ Sbjct: 31 GLGRRKSATARVYLSPGEGVFVVNGRDINEYFTSK-LHRQFACQPLKILDLLGSYDVKVTLHGGGASGQAGAVRLGIARALNTIDPENNRKPLKSAGFLTRDSRVKERKKAGLKKARKAPQ 150
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_TROW8 (30S ribosomal protein S9 OS=Tropheryma whipplei (strain TW08/27) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 69/121 (57.02%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVS-QDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 G GRRK A ARV L G G F++N RD EY L Q+ PL L SYDV V HGGG SGQA A+ LG+ARAL + +++R PLK G LTRDSRV ERKKAGL KARKAPQ Sbjct: 31 GLGRRKSATARVYLSPGEGVFVVNGRDINEYFTSK-LHRQFACQPLKILDLLGSYDVKVTLHGGGASGQAGAVRLGIARALNTIDPENNRKPLKSAGFLTRDSRVKERKKAGLKKARKAPQ 150
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRGC (30S ribosomal protein S9 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P YDVFV +GGG GQA AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTVGQYDVFVNVNGGGYGGQAGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRA5 (30S ribosomal protein S9 OS=Streptococcus agalactiae serotype V GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK IN +D +EY+ L L I P + SYDVFV GGG +GQ+ AI G++RALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITINKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVVGGGYAGQSGAIRHGISRALLEVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRA3 (30S ribosomal protein S9 OS=Streptococcus agalactiae serotype III GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK IN +D +EY+ L L I P + SYDVFV GGG +GQ+ AI G++RALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITINKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVVGGGYAGQSGAIRHGISRALLEVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126
BLAST of CX286967 vs. ExPASy Swiss-Prot
Match: RS9_STRA1 (30S ribosomal protein S9 OS=Streptococcus agalactiae serotype Ia GN=rpsI PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 263 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQ 622 GTGRRK A+ARV L GTGK IN +D +EY+ L L I P + SYDVFV GGG +GQ+ AI G++RALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q Sbjct: 8 GTGRRKNAVARVRLVPGTGKITINKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVVGGGYAGQSGAIRHGISRALLEVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQ 126 The following BLAST results are available for this feature:
BLAST of CX286967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286967 ID=CX286967; Name=CX286967; organism=Citrus clementina; type=EST; length=623bpback to top |