CX287806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M_DICDI (AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 5.789e-27 Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTM-AEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 TR+E +V +KS F +KMF V + IP PK TA V +G+AKY D ++W+IR+FPG TE T+ AEVEL++++ +KK+W+RPPI MEFQV MFTASG VRF Sbjct: 304 TRLECSVTVKSNFSSKMFGANVKVIIPTPKNTAVCKIVVAAGKAKYMPEQDAIIWRIRRFPGDTEFTLRAEVELMASVNLDKKAWSRPPISMEFQVTMFTASGFSVRF 411
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2MA_DANRE (AP-2 complex subunit mu-1-A OS=Danio rerio GN=ap2m1a PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 300 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 404
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_XENTR (AP-2 complex subunit mu-1 OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_XENLA (AP-2 complex subunit mu-1 OS=Xenopus laevis GN=ap2m1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_RAT (AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_PONAB (AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_MOUSE (AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_MACFA (AP-2 complex subunit mu-1 OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_HUMAN (AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 299 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 403
BLAST of CX287806 vs. ExPASy Swiss-Prot
Match: AP2M1_CHICK (AP-2 complex subunit mu-1 OS=Gallus gallus GN=AP2M1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 TRMEVNVKIKSVFGAKMFALGVVIKIPVPKQTAKTSFQVTSGRAKYNASIDCLVWKIRKFPGQTEPTMSAEVELISTMAEKKSWTRPPIQMEFQVPMFTASGLRVRF 322 T++EV V IKS F + A + ++IP P T+ G+AKY AS + +VWKI++ G E +SAE+EL+ T +KK W RPPI M F+VP F SGL+VR+ Sbjct: 297 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPT-NDKKKWARPPISMNFEVP-FAPSGLKVRY 401 The following BLAST results are available for this feature:
BLAST of CX287806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287806 ID=CX287806; Name=CX287806; organism=Citrus clementina; type=EST; length=324bpback to top |