CX288721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.682e-34 Identity = 71/189 (37.57%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAG------VWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578 D+ + L+D YAKCG +D A +F++ K WN+MI HG+ + ++ F +M+++ IKPD VTF++++ C H+G V+ + F M Y + M+HY CM DL GRAG + +A E I MP D G W LLG CR+HGN+E+AE A++ + L P++ G Y ++ ++A+A Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP--KDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANA 469 HSP 2 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 44/162 (27.16%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVEL 491 + ++ + D + +VLID K + AR +FD M + +WNS+I+ Y H ++++ LF EM+ +KPD+V ++ +SAC +G + G H T+ + +VD + + G ++ A+E I + W ++ +HGN EL Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG-KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME-IFELCSDKTLFTWNAMITGLAMHGNGEL 333
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.196e-34 Identity = 72/192 (37.50%), Postives = 115/192 (59.90%), Query Frame = 3 Query: 6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581 ++++ ++I + LID+Y KCG ++ VF+ +KQ + WNSMI +G + ++ LF E+ + ++PD V+F+ +++AC H+G+V +F M E+Y I ++HY MV++ G AG L +A I +MP D +W +LL ACR GNVE+A+ A+ L LDP + YVLLSN +A G Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYG 475 HSP 2 Score: 77.411 bits (189), Expect = 5.624e-14 Identity = 51/183 (27.87%), Postives = 91/183 (49.73%), Query Frame = 3 Query: 30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARME----HYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHL--FDLDPQNSGYYVLLS 560 D +A + +I +AKCG +D A+ +FD M ++ +WNSMI+ + +G KD+L +F EM +KPD T +++++AC + G E G + H EY + R E ++D++ + G + + L P W +++ +G E A S L L+P + + +L+ Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG-RWIH----EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP-KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.746e-34 Identity = 73/193 (37.82%), Postives = 114/193 (59.07%), Query Frame = 3 Query: 30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNK--IKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHG-NVELAEVASSHLFDLDPQN-------SGYYVLLSNIHADA 578 D + ++ LI++Y KCG+L A VF M ++ A+WN+MI + HG ++++ F M++ + ++P+ VTF+ ++ AC H G V G YF M +Y I +EHY C+VDL RAG + +A++ + SMP PDA +W +LL AC G +VEL+E + ++ N SG YVLLS ++A A Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASA 480 HSP 2 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 47/165 (28.48%), Postives = 71/165 (43.03%), Query Frame = 3 Query: 6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYA--CMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494 ++K D + LI LY CG LD AR VFD M + +WNSMI A G +L LF EM +PD T +++SAC G + G + + + M+ +++++ + G L A + M D W ++ HG E A Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 339
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.746e-34 Identity = 76/186 (40.86%), Postives = 105/186 (56.45%), Query Frame = 3 Query: 27 SDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEM-LNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQN----SGYYVLLSNIH 569 SD + L+D+YAKCG ++ A VF+ + R+ +W ++I Y +G+ K + + + IKPD V L +++AC H G +E G M YGI + EHY+C+VDL RAGRL+ AL+ I MP P A VWG LL CR H NVEL E+A +L DL+ N V LSNI+ Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIY 437
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.893e-34 Identity = 74/179 (41.34%), Postives = 104/179 (58.10%), Query Frame = 3 Query: 45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581 + LID+YAKCG + VF M K N+ I+ +GH+K S A+F + I PD TFL ++ C HAG ++ G+ +F+ ++ Y + +EHY CMVDL+GRAG L+ A I MP P+A VWG LL CR+ + +LAE L L+P N+G YV LSNI++ G Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530 HSP 2 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 45/186 (24.19%), Postives = 88/186 (47.31%), Query Frame = 3 Query: 24 RSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVEL--AEVASSHLFDLDPQNSGYYVLLSN-IHA 572 + ++ + L++LYAKCG ++ AR+VFD M K W++MI Y + K+ + LF +ML +KPD + + +S+C G ++ G + + + + + ++D++ + G + + E M D + + +G+V+L A + + P S + LL +HA Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427 HSP 3 Score: 70.0922 bits (170), Expect = 8.979e-12 Identity = 39/152 (25.66%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLL 458 L++K D A + L+ +Y+ G L+ A +FD + + W ++ + Y G ++++ LF +M+ +KPD + ++SAC H G +++G M EE + +V+L+ + G++ KA +SM D W T++ Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 4.893e-34 Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 3 Query: 51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDL-DPQNSGYYVLLSNIHAD 575 L+D+Y KCG ++ A VF+ M K EA WN+MI AY GH K++L LF M + P +TF+ ++SAC HAG V G YFH M+ +G+ ++EHY ++DL RAG L++A E + P PD + +LGAC +V + E A L ++ + +N+G YV+ SN+ AD Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLAD 547 HSP 2 Score: 93.2041 bits (230), Expect = 9.904e-19 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494 S LI +Y KCG+LD AR VF+ M +K AW +MI Y +G ++ LF EM + PD T ++SACG G +E G E + + +VD++G+ GR+ +AL +MP +A W ++ A G+ + A Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAMITAYAHQGHAKEA 419 HSP 3 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 54/200 (27.00%), Postives = 93/200 (46.50%), Query Frame = 3 Query: 51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAG-IHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSM----------------------------------PFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGY 545 LI +YAKCG + +AR +FD + + +WNSMI+ Y G+ KD++ LF +M +PD T ++++ AC H G + G + +T++ G+ + + ++ ++G+ G L+ A N M +PDAG T+L AC G +EL + +H +L Q++ Y Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG--SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP337_ARATH (Pentatricopeptide repeat-containing protein At4g25270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.390e-34 Identity = 74/179 (41.34%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETI-NSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578 + LI LY+K G L A +FD M + +WN++I+A H + L F +M KPD +TF++++S C + G VE G F M++EYGI +MEHYACMV+L+GRAG + +A I M VWG LL AC +HGN ++ EVA+ LF+L+P N + LL I++ A Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKA 507 HSP 2 Score: 78.1814 bits (191), Expect = 3.297e-14 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 45 SVLIDLYAKCGNLDFARTVFDMMXRKQEA--AWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHG 479 S L+ LYA CG + A VFD M ++ + AWNS+I+ Y G +D++AL+ +M + +KPD TF ++ ACG G V+ G + +E G + +V ++ + G + KA + +P D W ++L HG Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH-KDYVSWNSMLTGYLHHG 275 HSP 3 Score: 70.0922 bits (170), Expect = 8.979e-12 Identity = 46/162 (28.40%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHV---TFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGN 482 ++K+ D + L+ +YAKCG++ AR VFDM+ K +WNSM+ Y HG L ++L +F M+ N I+PD V + LA + + H Q+ H G+ + ++ L+ + G+L +A + M D W ++ A + N Sbjct: 221 LVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL-------HGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSN 374
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.090e-33 Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYG-IPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581 +K +D + L+ +Y+ GN++ A +VF + +K +WNS+I HG K + +F +M+ +PD +TF ++SAC H G +E G F+ M+ I +++HY CMVD+ GR G+L +A E I M P+ VW LL ACR+H +V+ E A++ +F+LD ++S YVLLSNI+A AG Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAG 544 HSP 2 Score: 68.1662 bits (165), Expect = 3.412e-11 Identity = 43/177 (24.29%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQ 533 L+IK + + LI YA C + +R VFD +Q A W ++++ Y + +D+L++F ML N I P+ TF + +++C G ++ G H + + G+ +V ++ +G +N A+ + F W +++ C HG + A V + L+ + Sbjct: 250 LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.424e-33 Identity = 75/179 (41.90%), Postives = 102/179 (56.98%), Query Frame = 3 Query: 45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581 S L +Y+KCG+L+ VF K +WN+MI+ +G ++L LF EML ++PD VTF+ IISAC H G VE G YF+ M+++ G+ +++HYACMVDL RAG+L +A E I S +W LL AC+ HG EL A L L + S YV LS I+ G Sbjct: 462 SALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.859e-33 Identity = 76/191 (39.79%), Postives = 104/191 (54.45%), Query Frame = 3 Query: 12 KDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEM-LNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQN----SGYYVLLSNIH 569 K SD + L+D+YAKCG ++ A VF + R+ +W ++I Y +G+ K ++ + + IKPD V L +++AC H G +E G M Y I + EHY+C+VDL RAGRL+ AL I MP P A VWG LL CR H NVEL E+A +L DL+ N V LSNI+ Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIY 437 The following BLAST results are available for this feature:
BLAST of CX288721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288721 ID=CX288721; Name=CX288721; organism=Citrus clementina; type=EST; length=581bpback to top |