CX288721

Overview
NameCX288721
Unique NameCX288721
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.117e-45
Identity = 81/178 (45.51%), Postives = 120/178 (67.42%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            + L+D+YAKCGNL  A  VF+ + +K   +WN+M+   G HGH K+++ LF  M    I+PD VTF+A++ +C HAG ++ GI YF+ M + Y +  ++EHY C+VDL GR GRL +A++ + +MP  P+  +WG LLGACR+H  V++A+    +L  LDP + G Y LLSNI+A A
Sbjct:  354 NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 6.161e-45
Identity = 86/177 (48.59%), Postives = 119/177 (67.23%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLD-PQNSGYYVLLSNIHA 572
            S L+D+YAKCG ++ AR VFD M  K   +W SMI  YG +G+ +++L LF  M   +I+P++VTFL  +SAC H+G V+ G   F  M  +Y +  +MEHYAC+VDL GRAG LNKA E   +MP  PD+ +W  LL +C +HGNVELA +A+S LF L+  +  G Y+ LSN++A
Sbjct:  312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYA 488          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 8.046e-45
Identity = 85/185 (45.95%), Postives = 121/185 (65.41%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEM-LNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            D    SVL+ +Y KCG L  ++ +FD    K    WNS+I+ Y  HG  +++L +F EM L+   KP+ VTF+A +SAC +AG VE G+  +  M   +G+     HYACMVD+ GRAGR N+A+E I+SM   PDA VWG+LLGACR H  +++AE  +  L +++P+NSG Y+LLSN++A  G
Sbjct:  365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.051e-44
Identity = 84/181 (46.41%), Postives = 122/181 (67.40%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHA 572
            D    SVL+ +Y KCG L  A+ VFD    K    WNS+I+ Y  HG  +++L +FHEM ++   P+ VT +AI++AC +AG++E G+  F  M  ++ +   +EHY+C VD+ GRAG+++KA+E I SM   PDA VWG LLGAC+ H  ++LAEVA+  LF+ +P N+G YVLLS+I+A
Sbjct:  365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 82/176 (46.59%), Postives = 118/176 (67.05%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHA 572
            + LI +YAKCG++  A   F  +  K E +WN++I AY  HG   ++L  F +M+++ ++P+HVT + ++SAC H G V+ GI YF  M  EYG+  + EHY C+VD+  RAG L++A E I  MP  PDA VW TLL AC VH N+E+ E A+ HL +L+P++S  YVLLSN++A
Sbjct:  731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 79/184 (42.93%), Postives = 122/184 (66.30%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            D   ++ LID+YAKCG+L+ A TVF  M  +   +W+SMI AYG HG +  +++ F++M+ +  KP+ V F+ ++SACGH+G VE G +YF+ M + +G+    EH+AC +DL  R+G L +A  TI  MPF  DA VWG+L+  CR+H  +++ +   + L D+   ++GYY LLSNI+A+ G
Sbjct:  538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720          

HSP 2 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 3
Query:   27 SDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNV 485
            SD   ++ LID+Y+K G++D A TVF+ +  +    WNSM+  +  +G+  ++++LF  M ++ ++ + VTFLA+I AC   G +E G    H +    G+       A ++D++ + G LN A ET+     +     W +++ A  +HG +
Sbjct:  437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTA-LIDMYAKCGDLN-AAETVFRAMSSRSIVSWSSMINAYGMHGRI 586          

HSP 3 Score: 72.4034 bits (176), Expect = 1.809e-12
Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAG--IHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFD 521
            L++LYA+CG L    TV  ++  +   AWNS+I+ Y   G +  +L LF +M+  +IKPD  T  + ISAC +AG V  G  IH     T+      +      ++D++ ++G ++ A    N +        W ++L     +GN     V +  LFD
Sbjct:  345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS----LIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQNGN----SVEAISLFD 494          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.341e-44
Identity = 85/185 (45.95%), Postives = 121/185 (65.41%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEA-AWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            D +  + LID+YAKCG++  +  VFD M R+    +WNS+I  Y  +G+ +D+L +F  M  + I PD +TFL +++AC HAG+V  G   F  M  +YGI AR++H ACMVDL GR G L +A + I +    PDA +W +LLGACR+HG+    E+++  L +L+PQNS  YVLLSNI+A  G
Sbjct:  766 DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQG 950          

HSP 2 Score: 68.1662 bits (165), Expect = 3.412e-11
Identity = 35/140 (25.00%), Postives = 69/140 (49.29%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMP 422
            ++IK     +    + L+D+YAKCG L+ AR +F+ M  +    WN++I +Y    +  ++  LF  M    I  D     + + AC H   +  G    HC++ + G+   +   + ++D++ + G +  A +  +S+P
Sbjct:  453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591          

HSP 3 Score: 67.781 bits (164), Expect = 4.456e-11
Identity = 36/118 (30.51%), Postives = 57/118 (48.31%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKA 398
            + ++DLYAKC  + +A   FD +  K   AWNSM++ Y   G     L  F  +  N+I P+  TF  ++S C     VE G    HC   + G+         +VD++ +  R++ A
Sbjct:   99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG-RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214          

HSP 4 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 40/152 (26.32%), Postives = 72/152 (47.37%), Query Frame = 3
Query:    9 IKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGA 464
            IK    S+    S L+ +Y+KC  ++ A  VF+ +  K +  WN+MI  Y  +G     + LF +M ++    D  TF +++S C  +  +E G   FH +  +  +   +     +VD++ + G L  A +    M    D   W T++G+
Sbjct:  354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.058e-44
Identity = 80/177 (45.20%), Postives = 116/177 (65.54%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            LID+YAKCG+++ A  VF+ +  K  ++WN+MI  +  HG    S  LF  M    I+PD +TF+ ++SAC H+G ++ G H F  MT++Y +  ++EHY CM+DL G +G   +A E IN M   PD  +W +LL AC++HGNVEL E  + +L  ++P+N G YVLLSNI+A AG
Sbjct:  410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586          

HSP 2 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 43/144 (29.86%), Postives = 79/144 (54.86%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLG 461
            D ++ + LI  YA  G ++ A+ +FD +  K   +WN+MI+ Y   G+ K++L LF +M+   ++PD  T + ++SAC  +G +E G    H   +++G  + ++    ++DL+ + G L  A      +P+  D   W TL+G
Sbjct:  199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLIG 340          

HSP 3 Score: 80.4925 bits (197), Expect = 6.644e-15
Identity = 43/150 (28.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEE--YGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVE 488
            + LIDLY+KCG L+ A  +F+ +  K   +WN++I  Y      K++L LF EML +   P+ VT L+I+ AC H G ++ G  + H   ++   G+         ++D++ + G +  A +  NS+        W  ++    +HG  +
Sbjct:  305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 452          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.058e-44
Identity = 76/179 (42.46%), Postives = 121/179 (67.60%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + LI++Y+KCG +  A  +F  M  K   +W++MI+ Y  HG+   ++  F+EM   K+KP+ +TFL ++SAC H G  + G+ YF  M ++Y I  ++EHY C++D+  RAG+L +A+E   +MP  PD+ +WG+LL +CR  GN+++A VA  HL +L+P++ G YVLL+NI+AD G
Sbjct:  280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLG 458          

HSP 2 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 37/151 (24.50%), Postives = 75/151 (49.67%), Query Frame = 3
Query:   30 DNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGN 482
            D I+ + L+  YA+ G +  A+ +F +M  K   +W +MI+ Y   G   +++  F EM    I+PD ++ ++++ +C   G +E G  + H   E  G   +      +++++ + G +++A++    M    D   W T++     HGN
Sbjct:  174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISGYAYHGN 322          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.058e-44
Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQ-EAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + LID+Y++CGN+  AR VF+ M  K+   +W SMIA    HG  ++++ LF+EM    + PD ++F++++ AC HAG +E G  YF  M   Y I   +EHY CMVDL+GR+G+L KA + I  MP  P A VW TLLGAC  HGN+ELAE     L +LDP NSG  VLLSN +A AG
Sbjct:  308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487          
The following BLAST results are available for this feature:
BLAST of CX288721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
PP261_ARATH2.117e-4545.51Pentatricopeptide repeat-containing protein At3g29... [more]
PPR62_ARATH6.161e-4548.59Pentatricopeptide repeat-containing protein At1g28... [more]
PPR25_ARATH8.046e-4545.95Pentatricopeptide repeat-containing protein At1g09... [more]
PPR84_ARATH1.051e-4446.41Pentatricopeptide repeat-containing protein At1g56... [more]
PP307_ARATH1.792e-4446.59Pentatricopeptide repeat-containing protein At4g13... [more]
PP111_ARATH1.792e-4442.93Putative pentatricopeptide repeat-containing prote... [more]
PP220_ARATH2.341e-4445.95Pentatricopeptide repeat-containing protein At3g09... [more]
PPR21_ARATH3.058e-4445.20Pentatricopeptide repeat-containing protein At1g08... [more]
PP165_ARATH3.058e-4442.46Pentatricopeptide repeat-containing protein At2g20... [more]
PP122_ARATH3.058e-4448.89Pentatricopeptide repeat-containing protein At1g74... [more]

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Properties
Property NameValue
Genbank descriptionC02003F06SK IF1 Citrus clementina cDNA clone C02003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288721 ID=CX288721; Name=CX288721; organism=Citrus clementina; type=EST; length=581bp
GTTTGATGATAAAAGATTCCTGCCGCTCTGATAATATTGCTGAGAGTGTA
CTGATAGACTTGTATGCTAAATGTGGAAACTTGGATTTTGCTCGTACTGT
TTTTGACATGATGCANAGGAAGCAGGAAGCTGCATGGAATAGCATGATTG
CTGCTTATGGATGCCACGGCCATCTNAAGGACTCTCTTGCTCTTTTCCAT
GAAATGTTAAATAATAAAATCAAGCCAGATCATGTCACGTTTCTCGCTAT
AATATCTGCTTGTGGCCATGCTGGCCAAGTTGAAGCTGGAATTCATTACT
TCCATTGTATGACTGAAGAATATGGAATCCCAGCTCGCATGGAGCACTAT
GCATGCATGGTAGATTTGTTTGGGCGTGCTGGTCGTTTGAATAAGGCATT
AGAGACCATAAACAGTATGCCATTTGCACCTGATGCAGGTGTCTGGGGAA
CGTTGCTGGGAGCATGTCGGGTCCATGGCAATGTTGAGCTAGCTGAAGTG
GCTTCAAGTCATCTGTTTGATTTAGACCCACAAAACTCAGGCTACTATGT
GCTGCTTTCAAATATACATGCTGATGCTGGA
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