CX288721

Overview
NameCX288721
Unique NameCX288721
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.993e-44
Identity = 83/177 (46.89%), Postives = 111/177 (62.71%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            LID+YAKCG++  AR VFD M  K E  W S++  YG HG+ +++L +F EM     K D VT L ++ AC H+G ++ G+ YF+ M   +G+    EHYAC+VDL GRAGRLN AL  I  MP  P   VW   L  CR+HG VEL E A+  + +L   + G Y LLSN++A+AG
Sbjct:  519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695          

HSP 2 Score: 79.337 bits (194), Expect = 1.480e-14
Identity = 53/204 (25.98%), Postives = 88/204 (43.14%), Query Frame = 3
Query:   51 LIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALF-----------------------------------HEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYA-------CMVDLFGRAGRLNKALETINSM-PFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQ 533
            L+D+YAKCG +D A TVF  M  K   +WN+M+A Y   G  +D++ LF                                    +ML++ IKP+ VT ++++S C   G +  G    HC   +Y I  R   +         ++D++ +  +++ A    +S+ P   D   W  ++G    HG+   A    S +F+ D Q
Sbjct:  270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG-KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472          

HSP 3 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 45/167 (26.95%), Postives = 79/167 (47.31%), Query Frame = 3
Query:   12 KDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQE--AAWNSMIAAYGCHGHLKDSLALFHEMLNN--KIKPDHVTFLAIISACGHAGQVEAG--IHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494
            K+    +N+  + LID+YAKC  +D AR +FD +  K+     W  MI  Y  HG    +L L  EM     + +P+  T    + AC     +  G  IH +    ++  +P  + +  C++D++ + G ++ A    ++M  A +   W +L+    +HG  E A
Sbjct:  400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.993e-44
Identity = 82/184 (44.57%), Postives = 122/184 (66.30%), Query Frame = 3
Query:   27 SDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            SD    + L+D+YAKCG L  A  +FD +  K   +W  MIA YG HG  K+++ALF++M    I+ D ++F++++ AC H+G V+ G  +F+ M  E  I   +EHYAC+VD+  R G L KA   I +MP  PDA +WG LL  CR+H +V+LAE  +  +F+L+P+N+GYYVL++NI+A+A
Sbjct:  532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715          

HSP 2 Score: 67.3958 bits (163), Expect = 5.820e-11
Identity = 40/140 (28.57%), Postives = 71/140 (50.71%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTE-EYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLG 461
            + L+D+Y+KCG+LD A+ VF  M  +   ++ SMIA Y   G   +++ LF EM    I PD  T  A+++ C     ++ G      + E + G    + +   ++D++ + G + +A E + S     D   W T++G
Sbjct:  335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA-ELVFSEMRVKDIISWNTIIG 471          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.215e-44
Identity = 82/179 (45.81%), Postives = 118/179 (65.92%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + L+DLY+K G L+ + TVF  +      AW +M+AAY  HG  +D++  F  M++  I PDHVTF  +++AC H+G VE G HYF  M++ Y I  R++HY+CMVDL GR+G L  A   I  MP  P +GVWG LLGACRV+ + +L   A+  LF+L+P++   YV+LSNI++ +G
Sbjct:  274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASG 452          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.162e-43
Identity = 82/190 (43.16%), Postives = 124/190 (65.26%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHA 572
            ++ K    S+    S  +D+YAKCG+L  +  +F  +  K    WN++I+ +  H   K+ + LF +M  + + P+ VTF +++S CGH G VE G  +F  M   YG+   + HY+CMVD+ GRAG L++A E I S+PF P A +WG+LL +CRV+ N+ELAEVA+  LF+L+P+N+G +VLLSNI+A
Sbjct:  288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477          

HSP 2 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACG-HAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSM 419
            +I+     D    +VLI+ Y+KCG ++ AR VFD M  +   +WN+MI  Y  +    ++L +F EM N   K    T  +++SACG +   +E      HC++ +  I   +     ++DL+ + G +  A++   SM
Sbjct:   87 IIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC--KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.162e-43
Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + LI +Y+KCG++D A  VF+ M  +   +W SMI  +  HG     L  F++M+   +KP+ VT++AI+SAC H G V  G  +F+ M E++ I  +MEHYACMVDL  RAG L  A E IN+MPF  D  VW T LGACRVH N EL ++A+  + +LDP     Y+ LSNI+A AG
Sbjct:  513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAG 691          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.517e-43
Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + +ID+YAK GN+  A  VF+ +  +    W ++IA    HGH  ++LA+F+ M+   ++P+ VTF+AI+SAC H G V+ G   F+ M  +YGI   +EHY CM+DL GRAG+L +A E I SMPF  +A +WG+LL A  VH ++EL E A S L  L+P NSG Y+LL+N++++ G
Sbjct:  289 NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLG 467          

HSP 2 Score: 74.3294 bits (181), Expect = 4.761e-13
Identity = 39/148 (26.35%), Postives = 74/148 (50.00%), Query Frame = 3
Query:   45 SVLIDLYAKCGNLDFARTVFDMMXR--KQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGN 482
            + L+  Y K G +D AR++ +MM    + E +W  +I+ Y   G   +++ +F  ML   ++PD VT LA++SAC   G +E G        +  G+   +     ++D++ ++G + KAL+    +    +   W T++     HG+
Sbjct:  186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGH 331          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.517e-43
Identity = 84/184 (45.65%), Postives = 121/184 (65.76%), Query Frame = 3
Query:   36 IAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNK-IKPDHVTFLAIISACGHAGQVEAGIHYFHCMTE-EYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            + ++ LID+Y+KCGNL +AR +FD M  +   +WN+M+  Y  HG  ++ L LF  M + K +KPD VT LA++S C H    + G++ F  M   EYG     EHY C+VD+ GRAGR+++A E I  MP  P AGV G+LLGACRVH +V++ E     L +++P+N+G YV+LSN++A AG
Sbjct:  290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473          

HSP 2 Score: 70.4774 bits (171), Expect = 6.875e-12
Identity = 38/139 (27.34%), Postives = 70/139 (50.36%), Query Frame = 3
Query:    6 MIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMP 422
            MIK          + L+  Y KC  L+ AR V D M  K   +W +MI+ Y   GH  ++L +F EM+ +  KP+  TF  ++++C  A  +  G    H +  ++   + +   + ++D++ +AG++ +A E    +P
Sbjct:   78 MIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG-KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP371_ARATH (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.982e-43
Identity = 83/174 (47.70%), Postives = 115/174 (66.09%), Query Frame = 3
Query:   54 IDLYAKCGNLDFARTVFDMMXRKQE-AAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHA 572
            I++Y+KCG +D A+ +F+ +  ++   +WNSMI +   HG   ++L LF +ML    KPD VTF+ ++ AC H G V  G   F  M E + I  ++EHY CM+DL GR G+L +A + I +MP  PDA VWGTLLGAC  HGNVE+AE+AS  LF L+P N G  V++SNI+A
Sbjct:  257 IEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYA 430          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.588e-43
Identity = 81/193 (41.97%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    3 LMIKDSCRSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADAG 581
            +MIK   +S+ I +S L+D+Y KC +      VFD +  +    W S+I+ YG HG + + L  F +M     +P+ VTFL +++AC H G V+ G  +F+ M  +YGI    +HYA MVD  GRAGRL +A E +   P      VWG+LLGACR+HGNV+L E+A++   +LDP N G YV+ +N +A  G
Sbjct:  234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426          
BLAST of CX288721 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.588e-43
Identity = 81/185 (43.78%), Postives = 118/185 (63.78%), Query Frame = 3
Query:   24 RSDNIAESVLIDLYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVEAGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELAEVASSHLFDLDPQNSGYYVLLSNIHADA 578
            R D    S LID++AKCG+++ AR VFD    +    W++MI  YG HG  +++++L+  M    + P+ VTFL ++ AC H+G V  G  +F+ M + + I  + +HYAC++DL GRAG L++A E I  MP  P   VWG LL AC+ H +VEL E A+  LF +DP N+G+YV LSN++A A
Sbjct:  355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538          

HSP 2 Score: 78.1814 bits (191), Expect = 3.297e-14
Identity = 41/146 (28.08%), Postives = 74/146 (50.68%), Query Frame = 3
Query:   60 LYAKCGNLDFARTVFDMMXRKQEAAWNSMIAAYGCHGHLKDSLALFHEMLNNKIKPDHVTFLAIISACGHAGQVE-AGIHYFHCMTEEYGIPARMEHYACMVDLFGRAGRLNKALETINSMPFAPDAGVWGTLLGACRVHGNVELA 494
            +YAKCG +  A+ +FD M       WN+MI+ Y  +G+ ++++ +FHEM+N  ++PD ++  + ISAC   G +E A   Y +    +Y     +   + ++D+F + G +  A   +       D  VW  ++    +HG    A
Sbjct:  266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408          
The following BLAST results are available for this feature:
BLAST of CX288721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
PP390_ARATH3.993e-4446.89Pentatricopeptide repeat-containing protein At5g16... [more]
PP320_ARATH3.993e-4444.57Pentatricopeptide repeat-containing protein At4g18... [more]
PP411_ARATH5.215e-4445.81Pentatricopeptide repeat-containing protein At5g40... [more]
PP364_ARATH1.162e-4343.16Pentatricopeptide repeat-containing protein At5g04... [more]
PP272_ARATH1.162e-4346.93Pentatricopeptide repeat-containing protein At3g49... [more]
PP433_ARATH1.517e-4345.25Pentatricopeptide repeat-containing protein At5g56... [more]
PP227_ARATH1.517e-4345.65Putative pentatricopeptide repeat-containing prote... [more]
PP371_ARATH1.982e-4347.70Pentatricopeptide repeat-containing protein At5g08... [more]
PP315_ARATH2.588e-4341.97Pentatricopeptide repeat-containing protein At4g16... [more]
PP224_ARATH2.588e-4343.78Pentatricopeptide repeat-containing protein At3g12... [more]

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Properties
Property NameValue
Genbank descriptionC02003F06SK IF1 Citrus clementina cDNA clone C02003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288721 ID=CX288721; Name=CX288721; organism=Citrus clementina; type=EST; length=581bp
GTTTGATGATAAAAGATTCCTGCCGCTCTGATAATATTGCTGAGAGTGTA
CTGATAGACTTGTATGCTAAATGTGGAAACTTGGATTTTGCTCGTACTGT
TTTTGACATGATGCANAGGAAGCAGGAAGCTGCATGGAATAGCATGATTG
CTGCTTATGGATGCCACGGCCATCTNAAGGACTCTCTTGCTCTTTTCCAT
GAAATGTTAAATAATAAAATCAAGCCAGATCATGTCACGTTTCTCGCTAT
AATATCTGCTTGTGGCCATGCTGGCCAAGTTGAAGCTGGAATTCATTACT
TCCATTGTATGACTGAAGAATATGGAATCCCAGCTCGCATGGAGCACTAT
GCATGCATGGTAGATTTGTTTGGGCGTGCTGGTCGTTTGAATAAGGCATT
AGAGACCATAAACAGTATGCCATTTGCACCTGATGCAGGTGTCTGGGGAA
CGTTGCTGGGAGCATGTCGGGTCCATGGCAATGTTGAGCTAGCTGAAGTG
GCTTCAAGTCATCTGTTTGATTTAGACCCACAAAACTCAGGCTACTATGT
GCTGCTTTCAAATATACATGCTGATGCTGGA
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