CX288736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_KOSOT (50S ribosomal protein L18 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplR PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29 Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 175 RTKREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 R ++E R RH R++ KI GTPERPRL V+RS +H+Y Q+IDD T+ SAST+ K + ++L + E +K+VG++IAK EKGI K+ FDRGG+ +HGRI++LADAARE GL+ Sbjct: 5 RDRKELRRKRHLRVRSKIKGTPERPRLAVYRSERHIYAQIIDDIAGRTIVSASTVDKELREKLTKTWNQ--EAAKEVGKLIAKRAAEKGIKKIVFDRGGFKFHGRIKSLADAAREAGLE 121
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACA2 (50S ribosomal protein L18 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplR PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29 Identity = 66/118 (55.93%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 178 TKREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 +K R RH+R++ K+ GT ERPRL VFRSNKH+Y Q+IDD TLASAST+ K ++ E S+G + + KVGE++AK EKG++ V FDRGGY YHGR++ALADAARE GL+ Sbjct: 6 SKNAARQKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVE---STGDS-AAAAKVGELVAKRASEKGVSDVVFDRGGYLYHGRVKALADAAREAGLK 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_SORC5 (50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 193 RTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGL 528 R R RI+KK++GTPERPRL VFRS+KH+Y QVIDD TLA AST+ K + LD + +E +KKVG +IA+ C E+ I KV FDR GY YHGR+ ALA AARE GL Sbjct: 8 RERRKLRIRKKVEGTPERPRLSVFRSSKHIYAQVIDDVSGKTLAHASTLSKDLKGSLDEDN--KVEAAKKVGALIARICKERQIDKVVFDRNGYLYHGRVSALAQAAREAGL 117
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_CARHZ (50S ribosomal protein L18 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 190 DRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 +R RH R++KKI GTPERPRL V+RS KH+Y Q+IDD TL +AST+ + ++ Y G IE +K VG +IA+ KGI KV FDRGGY YHGR++ALA+AARE GLQ Sbjct: 10 ERKRRHLRVRKKIHGTPERPRLNVYRSLKHIYAQIIDDVSGRTLVAASTLDPELRGKIGY--GGNIEAAKAVGRLIAERAKAKGIEKVVFDRGGYLYHGRVKALAEAAREGGLQ 121
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACHK (50S ribosomal protein L18 OS=Bacillus thuringiensis subsp. konkukian GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACCZ (50S ribosomal protein L18 OS=Bacillus cereus (strain ZK / E33L) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACCR (50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACCQ (50S ribosomal protein L18 OS=Bacillus cereus (strain Q1) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACC7 (50S ribosomal protein L18 OS=Bacillus cereus (strain AH187) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119
BLAST of CX288736 vs. ExPASy Swiss-Prot
Match: RL18_BACC4 (50S ribosomal protein L18 OS=Bacillus cereus (strain B4264) GN=rplR PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.034e-29 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 181 KREDRTARHSRIKKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 531 K R RH+R++ K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQ Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQ 119 The following BLAST results are available for this feature:
BLAST of CX288736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288736 ID=CX288736; Name=CX288736; organism=Citrus clementina; type=EST; length=532bpback to top |