CX288864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NQO4_PARDE (NADH-quinone oxidoreductase subunit 4 OS=Paracoccus denitrificans GN=nqo4 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.389e-14 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LV++G+N+P+R K+RAPG AHLQ +D MS+ HM ADV II T DIV GEVDR Sbjct: 356 FGVYLVADGTNKPWRAKLRAPGFAHLQSIDWMSRGHMLADVPAIIATLDIVFGEVDR 412
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RHOP5 (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisA53) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.426e-14 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLVS+G+N+PY+ KIRAPG AHLQ +D +++ H+ ADV I+G+ DIV GEVDR Sbjct: 340 FGVFLVSDGTNKPYKCKIRAPGFAHLQAMDFVTRGHLLADVSAILGSLDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ANAPZ (NADH-quinone oxidoreductase subunit D OS=Anaplasma phagocytophilum (strain HZ) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.426e-14 Identity = 34/57 (59.65%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV++VS+G+N+PYR +IR+PG AHLQ +D+M++ HM AD+ IIG+ DIV GE+DR Sbjct: 339 FGVYIVSDGTNKPYRCRIRSPGFAHLQAIDAMARGHMLADLPVIIGSLDIVFGEIDR 395
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_JANSC (NADH-quinone oxidoreductase subunit D OS=Jannaschia sp. (strain CCS1) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLV++G+N+PYR K+RAPG AHLQ +D + K H ADV ++G+ DIV GEVDR Sbjct: 356 FGVFLVADGTNKPYRAKLRAPGFAHLQAMDYLCKGHQLADVSAVLGSLDIVFGEVDR 412
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_HYPNA (NADH-quinone oxidoreductase subunit D OS=Hyphomonas neptunium (strain ATCC 15444) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LV++G+NRPYR KIRAPG HLQ +D + K H ADV ++GT DIV GE+DR Sbjct: 336 FGVYLVADGTNRPYRAKIRAPGYPHLQAMDYLCKGHQLADVSAVLGTLDIVFGEIDR 392
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BRASB (NADH-quinone oxidoreductase subunit D OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+GSN+PY+ KIRAPG AHLQ +D + + H+ ADV I+G+ DIV GEVDR Sbjct: 342 FGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFLCRGHLLADVSAILGSLDIVFGEVDR 398
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BART1 (NADH-quinone oxidoreductase subunit D OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+G+N+PYR K+RAPG AHLQ +D +++ HM AD I+G+ DIV GEVDR Sbjct: 340 FGVYLVSDGTNKPYRVKLRAPGFAHLQAMDFLTRGHMLADATAILGSIDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BARHE (NADH-quinone oxidoreductase subunit D OS=Bartonella henselae GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+G+N+PYR K+RAPG AHLQ +D +++ HM AD I+G+ DIV GEVDR Sbjct: 340 FGVYLVSDGTNKPYRVKLRAPGFAHLQAMDFLTRGHMLADATAILGSIDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BARBK (NADH-quinone oxidoreductase subunit D OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+G+N+PYR K+RAPG AHLQ +D +++ HM AD I+G+ DIV GEVDR Sbjct: 340 FGVYLVSDGTNKPYRVKLRAPGFAHLQAMDFLTRGHMLADATAILGSIDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPS (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisB5) GN=nuoD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.550e-14 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+GSN+PY+ KIRAPG AHLQ +D + + H+ ADV I+G+ DIV GEVDR Sbjct: 360 FGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFICRGHLLADVSAILGSLDIVFGEVDR 416 The following BLAST results are available for this feature:
BLAST of CX288864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288864 ID=CX288864; Name=CX288864; organism=Citrus clementina; type=EST; length=520bpback to top |