CX288864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NDUS2_NICSY (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Nicotiana sylvestris GN=NAD7 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.047e-24 Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLVSNGSNRPYRRKIRAP AH QGLDSMSKHHMPADVVTIIGTQDIVSGEVDR Sbjct: 338 FGVFLVSNGSNRPYRRKIRAPCFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 394
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NDUS2_ARATH (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Arabidopsis thaliana GN=NAD7 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22 Identity = 52/57 (91.23%), Postives = 52/57 (91.23%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLVSNGSNRPYR KIRAPG AHLQGLD MSKHHM ADVVTIIGTQDIV GEVDR Sbjct: 338 FGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NDUS2_NEPOL (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Nephroselmis olivacea GN=NAD7 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVSNG+NRPYR KIRAPG HLQGLD MSK+HM ADVVTIIGTQDIV GEVDR Sbjct: 342 FGVYLVSNGTNRPYRCKIRAPGFLHLQGLDMMSKNHMLADVVTIIGTQDIVFGEVDR 398
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NDUS2_PROWI (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii GN=NAD7 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.968e-19 Identity = 45/57 (78.95%), Postives = 52/57 (91.23%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVSNG+++PYR KIRAPG AHLQGLD M+++HM ADVVTIIGTQDIV GEVDR Sbjct: 344 FGVYLVSNGTSKPYRCKIRAPGFAHLQGLDFMARNHMLADVVTIIGTQDIVFGEVDR 400
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIMF (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIMB (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup B GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIMA (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup A GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIM0 (NADH-quinone oxidoreductase subunit D OS=Neisseria meningitidis serogroup C (strain 053442) GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIG2 (NADH-quinone oxidoreductase subunit D OS=Neisseria gonorrhoeae (strain NCCP11945) GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NEIG1 (NADH-quinone oxidoreductase subunit D OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=nuoD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 42/57 (73.68%), Postives = 50/57 (87.72%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+++S+G+N+PYR KIRAPG AHLQG+D M+K HM ADVV IIGTQDIV GEVDR Sbjct: 362 FGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR 418 The following BLAST results are available for this feature:
BLAST of CX288864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288864 ID=CX288864; Name=CX288864; organism=Citrus clementina; type=EST; length=520bpback to top |