CX288864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NITMU (NADH-quinone oxidoreductase subunit D OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=nuoD PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.528e-17 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N PYR KIRAPG AHL LD MS+ HM ADVV IIGTQDIV GE+DR Sbjct: 361 FGIYLISDGANMPYRMKIRAPGFAHLAALDEMSRGHMIADVVAIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BURXL (NADH-quinone oxidoreductase subunit D OS=Burkholderia xenovorans (strain LB400) GN=nuoD PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.528e-17 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N+PYR KIRAPG AHL LD M++ HM AD VTIIGTQDIV GEVDR Sbjct: 361 FGIYLISDGANKPYRLKIRAPGYAHLSTLDEMARGHMIADAVTIIGTQDIVFGEVDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_BURPP (NADH-quinone oxidoreductase subunit D OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoD PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.528e-17 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N+PYR KIRAPG AHL LD M++ HM AD VTIIGTQDIV GEVDR Sbjct: 361 FGIYLISDGANKPYRLKIRAPGYAHLSTLDEMARGHMIADAVTIIGTQDIVFGEVDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_POLSQ (NADH-quinone oxidoreductase subunit D OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N+PYR KIRAPG HL +D MS+ HM AD VTIIGTQDIV GE+DR Sbjct: 361 FGIYLISDGANKPYRMKIRAPGFVHLSAMDEMSRGHMLADAVTIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_POLNS (NADH-quinone oxidoreductase subunit D OS=Polynucleobacter necessarius (strain STIR1) GN=nuoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.244e-16 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N+PYR KIRAPG HL +D MS+ HM AD VTIIGTQDIV GE+DR Sbjct: 361 FGIYLISDGANKPYRMKIRAPGFVHLSSMDEMSRGHMLADAVTIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NITEU (NADH-quinone oxidoreductase subunit D OS=Nitrosomonas europaea GN=nuoD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-16 Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG+++VS+G+N+PYR KIRAPG AHL LD M+K HM AD+V IIGTQDIV GE+DR Sbjct: 361 FGIYIVSDGANKPYRLKIRAPGFAHLAALDEMTKGHMIADLVAIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_CUPTR (NADH-quinone oxidoreductase subunit D OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=nuoD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.625e-16 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++ +S+G+N+PYR KIRAPG AHL LD M+K HM AD VTIIGTQDIV GE+DR Sbjct: 361 FGIYAISDGANKPYRLKIRAPGFAHLAALDEMAKGHMIADAVTIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_CHRVO (NADH-quinone oxidoreductase subunit D OS=Chromobacterium violaceum GN=nuoD PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++LVS+G+N+PYR KIRAPG AHL LD M+ HM ADVV IIGTQDIV GE+DR Sbjct: 361 FGIYLVSDGANKPYRLKIRAPGYAHLAALDEMATGHMIADVVAIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_METFK (NADH-quinone oxidoreductase subunit D OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16 Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++L+S+G+N+PYR KIRAPG AHL LD M++ HM AD+V IIGTQDIV GE+DR Sbjct: 361 FGIYLISDGANKPYRLKIRAPGFAHLAALDEMTRGHMIADLVAIIGTQDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RICM5 (NADH-quinone oxidoreductase subunit D OS=Rickettsia massiliae (strain Mtu5) GN=nuoD PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L S G NRPYR +I+APG AHLQGLD MSK H+ ADV+TII T DIV GE+DR Sbjct: 335 FGVYLYSQGGNRPYRCRIKAPGFAHLQGLDFMSKGHLMADVITIIATLDIVFGEIDR 391 The following BLAST results are available for this feature:
BLAST of CX288864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288864 ID=CX288864; Name=CX288864; organism=Citrus clementina; type=EST; length=520bpback to top |