CX288864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ACIAC (NADH-quinone oxidoreductase subunit D OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=nuoD PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.797e-15 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++LVS+G+N+PYR KIRAPG AHL LD M++ HM AD V IIGT DIV GE+DR Sbjct: 361 FGIYLVSDGANKPYRLKIRAPGFAHLATLDEMARGHMIADAVAIIGTMDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_NITOC (NADH-quinone oxidoreductase subunit D OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L+S+G+N+PYR K+RAPG AHL +D M + HM ADVV IIGT DIV GE+DR Sbjct: 361 FGVYLISDGANKPYRLKVRAPGFAHLAAMDEMVQGHMLADVVAIIGTMDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_MARMM (NADH-quinone oxidoreductase subunit D OS=Maricaulis maris (strain MCS10) GN=nuoD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LVS+GSN+PYR KIRAPG AHL +D MSK HM ADV IIG+ D+V GE+DR Sbjct: 346 FGVYLVSDGSNKPYRLKIRAPGFAHLAAMDYMSKGHMLADVSAIIGSLDVVFGEIDR 402
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_LEPCP (NADH-quinone oxidoreductase subunit D OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=nuoD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.347e-15 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG++ +S+G+N+PYR KIRAPG AHL LD MS+ HM AD V IIGT DIV GE+DR Sbjct: 361 FGIYAISDGANKPYRLKIRAPGFAHLAALDEMSRGHMIADAVAIIGTMDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ACISJ (NADH-quinone oxidoreductase subunit D OS=Acidovorax sp. (strain JS42) GN=nuoD PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.065e-15 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FG+++VS+G+N+PYR KIRAPG AHL LD M++ HM AD V IIGT DIV GE+DR Sbjct: 361 FGIYMVSDGANKPYRLKIRAPGFAHLATLDEMARGHMLADAVAIIGTMDIVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RICPR (NADH-quinone oxidoreductase subunit D OS=Rickettsia prowazekii GN=nuoD PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.003e-15 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L S G N+PYR +I+APG AHLQGL+ MSK H+ ADV+TII T DIV GE+DR Sbjct: 333 FGVYLYSQGGNKPYRCRIKAPGFAHLQGLNFMSKGHLIADVITIIATLDIVFGEIDR 389
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RHOCA (NADH-quinone oxidoreductase subunit D OS=Rhodobacter capsulatus GN=nuoD PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.003e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LV++G+N+PYR KIRAPG AHLQ +D+++K H ADV IIGT D+V GE+DR Sbjct: 357 FGVYLVADGTNKPYRAKIRAPGYAHLQSIDAVAKGHQLADVSAIIGTMDVVFGEIDR 413
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ROSDO (NADH-quinone oxidoreductase subunit D OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=nuoD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LV++G+N+PYR KIRAPG HLQ +D MS+ H ADV IIGT D+V GE+DR Sbjct: 351 FGVYLVADGTNKPYRAKIRAPGFLHLQAMDHMSRGHQLADVAAIIGTMDVVFGEIDR 407
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_AZOSB (NADH-quinone oxidoreductase subunit D OS=Azoarcus sp. (strain BH72) GN=nuoD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+ VS+G+N+PYR K+RAPG AHL +D +S+ HM ADVV IIGT D+V GE+DR Sbjct: 361 FGVYAVSDGANKPYRLKLRAPGFAHLAAMDEISRGHMIADVVAIIGTMDVVFGEIDR 417
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ANAMM (NADH-quinone oxidoreductase subunit D OS=Anaplasma marginale (strain St. Maries) GN=nuoD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15 Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV++VS+G+NRPYR +IRAPG AHLQ +D+M++ HM AD+ IIG+ DIV GE+DR Sbjct: 342 FGVYIVSDGTNRPYRCRIRAPGFAHLQAIDAMARGHMLADLTAIIGSLDIVFGEIDR 398 The following BLAST results are available for this feature:
BLAST of CX288864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288864 ID=CX288864; Name=CX288864; organism=Citrus clementina; type=EST; length=520bpback to top |