CX288864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_DINSH (NADH-quinone oxidoreductase subunit D OS=Dinoroseobacter shibae (strain DFL 12) GN=nuoD PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.828e-15 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFL S+G+NRPYR KIRAPG HLQ +D ++K H ADV IIGT D+V GE+DR Sbjct: 348 FGVFLKSDGTNRPYRAKIRAPGYLHLQSMDHVAKGHQLADVAAIIGTMDVVFGEIDR 404
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RICTY (NADH-quinone oxidoreductase subunit D OS=Rickettsia typhi GN=nuoD PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L S G N+PYR +I+APG AHLQGL+ MSK H+ +DV+TII T DIV GE+DR Sbjct: 333 FGVYLYSQGGNKPYRCRIKAPGFAHLQGLNFMSKGHLISDVITIIATLDIVFGEIDR 389
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPB (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisB18) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLVS+GSN+PY+ KIRAPG AHLQ +D +S+ H+ ADV I+G+ DIV GEVDR Sbjct: 340 FGVFLVSDGSNKPYKCKIRAPGFAHLQAMDFISRGHLLADVSAILGSLDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ORITI (NADH-quinone oxidoreductase subunit D OS=Orientia tsutsugamushi (strain Ikeda) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L S+G+NRPYR +I+APG AHLQGLD M++ H +D++TII T DIV GE+DR Sbjct: 340 FGVYLYSDGTNRPYRCRIKAPGFAHLQGLDFMARGHSLSDIITIIATLDIVFGEIDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_ORITB (NADH-quinone oxidoreductase subunit D OS=Orientia tsutsugamushi (strain Boryong) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+L S+G+NRPYR +I+APG AHLQGLD M++ H +D++TII T DIV GE+DR Sbjct: 340 FGVYLYSDGTNRPYRCRIKAPGFAHLQGLDFMARGHSLSDIITIIATLDIVFGEIDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_OCHA4 (NADH-quinone oxidoreductase subunit D OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGVFLVS+GSN+PYR K+RAPG AHLQ +D + + HM ADV I+G+ DIV GEVDR Sbjct: 340 FGVFLVSDGSNKPYRCKLRAPGFAHLQAMDFLCRGHMLADVSAILGSLDIVFGEVDR 396
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_EHRRW (NADH-quinone oxidoreductase subunit D OS=Ehrlichia ruminantium (strain Welgevonden) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV++VS+G+N+PYR +IRAPG AHLQ +D M+K HM AD+ IIG+ DIV GE+DR Sbjct: 337 FGVYIVSDGTNKPYRCRIRAPGFAHLQAIDMMAKGHMLADLTAIIGSLDIVFGEIDR 393
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_EHRRG (NADH-quinone oxidoreductase subunit D OS=Ehrlichia ruminantium (strain Gardel) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV++VS+G+N+PYR +IRAPG AHLQ +D M+K HM AD+ IIG+ DIV GE+DR Sbjct: 337 FGVYIVSDGTNKPYRCRIRAPGFAHLQAIDMMAKGHMLADLTAIIGSLDIVFGEIDR 393
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_EHRCR (NADH-quinone oxidoreductase subunit D OS=Ehrlichia chaffeensis (strain Arkansas) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV++VS+G+N+PYR +IRAPG AHLQ +D M+K HM AD+ IIG+ DIV GE+DR Sbjct: 337 FGVYIVSDGTNKPYRCRIRAPGFAHLQAIDMMAKGHMLADLTAIIGSLDIVFGEIDR 393
BLAST of CX288864 vs. ExPASy Swiss-Prot
Match: NUOD_SILST (NADH-quinone oxidoreductase subunit D OS=Silicibacter sp. (strain TM1040) GN=nuoD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 349 FGVFLVSNGSNRPYRRKIRAPGSAHLQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 519 FGV+LV++GSN+PYR K+RAPG HLQ +D ++K H ADV IIGT DIV GE+DR Sbjct: 347 FGVYLVADGSNKPYRAKLRAPGFLHLQAMDYVAKGHQLADVAAIIGTMDIVFGEIDR 403 The following BLAST results are available for this feature:
BLAST of CX288864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288864 ID=CX288864; Name=CX288864; organism=Citrus clementina; type=EST; length=520bpback to top |