CX288880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.545e-23 Identity = 71/166 (42.77%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW 510 +AQVVGWPP+RS+RKN + QK EE + N +VKVSM GAPYLRK+DLK+YKSY EL AL MF KC F E Y G NGS+Y PTYEDKDGDWMLVGDVPW Sbjct: 68 KAQVVGWPPIRSYRKNNVQ-QKKEEESEG--------NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF---------------------------KCIFGE------------YSEREG----------------YNGSEYAPTYEDKDGDWMLVGDVPW 169
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 6.269e-22 Identity = 67/167 (40.12%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQ+VGWPPVRS+RKN + +K EG +VKVSMDGAPYLRK+DL +YK Y EL +L MF F++G Y F +E G +G DF+ PTYEDKDGDWMLVGDVPWE Sbjct: 60 KAQIVGWPPVRSYRKNNVQTKKSESEGQGN----------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF-KFSVGEY---------------------FERE-----------------GYKG-SDFV---------------PTYEDKDGDWMLVGDVPWE 161
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.069e-21 Identity = 68/166 (40.96%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW 510 + QVVGWPP+RSFRKN + QK E+GD ++KVSM GAPYLRK+DLK+YKSY EL AL +F KC F E Y G G S+Y PTYEDKDGDWMLVGDVPW Sbjct: 78 KVQVVGWPPIRSFRKNSLQ-QKKVEQGDGTGM--------YLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLF---------------------------KCTFGE------------YSEREGYNG----------------SEYAPTYEDKDGDWMLVGDVPW 179
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.182e-20 Identity = 65/167 (38.92%), Postives = 75/167 (44.91%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 + Q+VGWPPVRS RKN +V++VKVSMDGAPYLRK+DLK YK+Y EL AL MF IG Y C +G K GS +VPTYEDKDGDWMLVGDVPW+ Sbjct: 58 KTQIVGWPPVRSSRKN-------------------NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMF-KVMIGEY-----------------------------------------CEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWD 150
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.492e-18 Identity = 62/172 (36.05%), Postives = 74/172 (43.02%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIM-----AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPPVR++R+N A + GD K +VKVSMDGAPYLRKVDLK+ K Y+EL +AL +F+ KCF S G D + YEDKDGD MLVGDVPWE Sbjct: 86 KAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFT--------------------------KCF-----------------SATASDGCSD-------------GQFAIAYEDKDGDLMLVGDVPWE 201
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 64/194 (32.99%), Postives = 92/194 (47.42%), Query Frame = 1 Query: 22 VVGWPPVRSFRKNI-------MAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSD-YVPTYEDKDGDWMLVGDVPWE*VHSFLLRYIRVSTTNQ*NHDM 579 VVGWPP+RSFR+N+ + ++ N+E D+KA VK++MDG P RKVDL++Y SYQ+LS A+ ++F F QK + G QG +D + LL+G+ Y YED DGD ML GD+PW+ V ++ +RV ++ HDM Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKR-PLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFL--------------------EAQK---------------DLSCAESGEQGAEDKI----FSGLLDGTGVYTLVYEDNDGDRMLAGDIPWK-VFVSTVKRLRVMRRSELPHDM 320
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16 Identity = 69/203 (33.99%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 22 VVGWPPVRSFRKNIMA---------------------VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE*VHSFL--LRYIRVSTTN 561 VVGWPP+R FR N + VQKD EEG+ K +VKV+MDG RKVDL ++SY+ L+ AL MF+ +IG C S N KL+D N ++Y TYED+DGDWMLVGDVPWE S + LR +R S N Sbjct: 112 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL------------------------------------------CASHN----TNSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDAN 261
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16 Identity = 69/203 (33.99%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 22 VVGWPPVRSFRKNIMA---------------------VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE*VHSFL--LRYIRVSTTN 561 VVGWPP+R FR N + VQKD EEG+ K +VKV+MDG RKVDL ++SY+ L+ AL MF+ +IG C S N KL+D N ++Y TYED+DGDWMLVGDVPWE S + LR +R S N Sbjct: 112 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL------------------------------------------CASHN----TNSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDAN 261
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTY 258 +AQ+VGWPPVRS+RKN + +K+ E + + +VKVSMDGAPYLRK+DL YK Y EL AL MF F++G Y Sbjct: 62 KAQIVGWPPVRSYRKNNIQSKKNESEHEGQGI--------YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMF-KFSVGEY 134
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTY 258 + Q+VGWPPVRS RKN +NK NV++VKVSMDGAPYLRK+DLK+YK+Y EL AL MF FT+G Y Sbjct: 53 KTQIVGWPPVRSNRKN----------NNNK-------NVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF-KFTVGEY 116 The following BLAST results are available for this feature:
BLAST of CX288880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288880 ID=CX288880; Name=CX288880; organism=Citrus clementina; type=EST; length=612bpback to top |