CX288880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.387e-45 Identity = 99/167 (59.28%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 + QVVGWPPVRSFRKN++AVQK E K N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNESKL DLLN SDYVPTYEDKDGDWMLVGDVPWE Sbjct: 88 KTQVVGWPPVRSFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTF------------------------------------------GNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWE 209
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.090e-45 Identity = 101/179 (56.42%), Postives = 112/179 (62.57%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQK----DNEEGDNK--------AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPPVRSFRKN+M+ QK D EG++K + VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIG Y G QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE Sbjct: 68 KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNY------------------------------------------GPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 204
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 5.454e-42 Identity = 91/166 (54.82%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW 510 +AQVVGWPPVR++RKN+MA QK E +A VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+Y G+QGM DFMNESK++DLLN S+YVP+YEDKDGDWMLVGDVPW Sbjct: 74 KAQVVGWPPVRNYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSY------------------------------------------GAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPW 195
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.617e-41 Identity = 95/171 (55.56%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPPVRS+RKNI+AVQ KD +G AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTI GNCGS G+ MNESK+ DLLNGS+YVPTYEDKDGDWMLVGDVPWE Sbjct: 118 KAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTI------------------------------------------GNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWE 245
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.909e-40 Identity = 91/173 (52.60%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDN---EEGDNKAXXXXXXNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPPVR++RKN+M QK + EE ++ A VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+G Y G+QGM DFMNESKL++LLN S+YVP+YEDKDGDWMLVGDVPWE Sbjct: 80 KAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNY------------------------------------------GAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.177e-36 Identity = 83/166 (50.00%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW 510 +AQVVGWPPVRS+RKN+M + + G A AFVKVSMDGAPYLRK+DL++YKSY ELS+AL MFSSFT+G + G +GM DFMNE KL+DL+N DYVP+YEDKDGDWMLVGDVPW Sbjct: 80 KAQVVGWPPVRSYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKH-----------------------------------------GGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPW 196
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.140e-34 Identity = 83/173 (47.98%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDN------KAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPP+RSFRKN MA + + G+N +A +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG + G CG +D +NES+L DLL GS+YV TYEDKD DWMLVGDVPWE Sbjct: 141 KAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQF------------------------------------GSHGGCG----RDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWE 273
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.325e-34 Identity = 82/170 (48.24%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQ-KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQ+VGWPPVRS+RKN +A K+++E D + FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+ G CGS G KD ++E+KL DLLNG DYV TYEDKDGDWMLVGDVPWE Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTL------------------------------------------GQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWE 304
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.713e-33 Identity = 85/169 (50.30%), Postives = 101/169 (59.76%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMA--VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPP+RS+RKN MA K+ +E D K V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G +C G G+QG ++ M+E KL DLL+GS++V TYEDKDGDWMLVGDVPWE Sbjct: 163 KAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLG---------------------QC------------------GLHGAQG-RERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWE 287
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30 Identity = 74/168 (44.05%), Postives = 95/168 (56.55%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEG--DNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW 510 +AQVVGWPP+RS+RKN MA+ + +G D +A +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G G + +D +++ +L+DL NG++ V TYEDKD DWMLVGDVPW Sbjct: 106 KAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGH----------------------------------------GESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPW 233 The following BLAST results are available for this feature:
BLAST of CX288880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288880 ID=CX288880; Name=CX288880; organism=Citrus clementina; type=EST; length=612bpback to top |