CX288880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.266e-14 Identity = 62/189 (32.80%), Postives = 77/189 (40.74%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQ----------------KDNEEGDNKAXXXXXXNVA------FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTYI*LTQPLFN*FPPIIHTTQKCFFKEVI*WVLFI*FVMYVGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 513 +AQVVGWPPVRS+RK+ Q KD N A + A VKVSMDGAPYLRK+DL++YK Y+EL +AL MF F+ G D N S+ + TY+DKDGD MLVGDVP++ Sbjct: 68 KAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFS-------------------------------------------------GAADGANPSE---------FAITYQDKDGDLMLVGDVPFD 198
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIM--------------AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG 252 +AQVVGWPPVRS+RK+ + A + ++ ++ A FVKVSMDGAPYLRK+DLK+YK Y+EL +AL MF F+ G Sbjct: 51 KAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGL----FVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGG 140
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.388e-13 Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTY 258 +A++VGWPP+RS+RKN +VQ+ +G FVKVSMDGAPYLRKVDLK+Y Y EL AL MF IG Y Sbjct: 75 KAKIVGWPPIRSYRKN--SVQEGEGDG------------IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMF-KLAIGEY 141
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12 Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGTY 258 +A++VGWPP+RS+RKN + E D FVKVSMDGAPYLRK+DL++Y Y EL AL MF TIG Y Sbjct: 68 KAKIVGWPPIRSYRKNSL------HEAD--------VGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMF-KLTIGEY 134
BLAST of CX288880 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12 Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 13 RAQVVGWPPVRSFRKNIM--------AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFT 246 + QVVGWPPV S+R++ A K G+ +VKVSMDGAPYLRKVDL++Y Y+EL DAL +F F+ Sbjct: 62 KVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFS 147 The following BLAST results are available for this feature:
BLAST of CX288880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288880 ID=CX288880; Name=CX288880; organism=Citrus clementina; type=EST; length=612bpback to top |