CX290074

Overview
NameCX290074
Unique NameCX290074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.721e-92
Identity = 162/234 (69.23%), Postives = 184/234 (78.63%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS--FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQLESVISQNSNSVDFYNFLLDSGMDPVSL 707
            WW YKSPYR+ENPSKPWPIILWLQGGPGASGVGIGNF+EVGPLDT+LKPRNSTWLKKADLLFVD+PVG GYS+VE N    +VK+D EAA DLT LL +LFNKN+ L +SPLFIVAESYGGK A  LGL+ +                  DSWISPEDFVFSWGPLLK +SRLD NG   SN +A+KIK Q++ GE+V AT +W  LE++IS  SN VDFYNFLLD+GMDPVSL
Sbjct:   49 WWHYKSPYRVENPSKPWPIILWLQGGPGASGVGIGNFQEVGPLDTFLKPRNSTWLKKADLLFVDSPVGAGYSFVEGNQKDLYVKSDEEAAQDLTKLLQQLFNKNQTLNQSPLFIVAESYGGKIAVKLGLSVIDAVQSGKLKLHLGGVILGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSLAEKIKTQIKNGEYVGATQTWMDLENLISSKSNFVDFYNFLLDTGMDPVSL 282          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.064e-51
Identity = 99/225 (44.00%), Postives = 138/225 (61.33%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQLESVISQNSNSVDFYNFLLDS 686
            WWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GPLD+ LKPR +TWL+ A LLFVDNPVGTG+SYV  + ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK AA +GL                     DSWISP D V SWGP L  MS L+  G A+ +++A+++   +  G +  AT+ W + E +I QN++ V+FYN L  S
Sbjct:   53 WWLYYATNSCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDSDLKPRKTTWLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTVPFYIFSESYGGKMAAGIGLELYKAIQRGTIKCNFAGVALGDSWISPVDSVLSWGPYLYSMSLLEDKGLAEVSKVAEQVLNAVNKGLYREATELWGKAEMIIEQNTDGVNFYNILTKS 276          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 101/228 (44.30%), Postives = 136/228 (59.65%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQLESVISQNSNSVDFYNFLLDSGMD 695
            WWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GPLDT LKPRN+TWL+ A LLFVDNPVGTG+SYV    ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK AA + L                     DSWISP D V SWGP L  +S LD  G A+ + IA+++   +  G +  AT  W + E +I +N++ V+FYN L  S  D
Sbjct:   53 WWLYYATNPCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISLELHKAIQQGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSVSLLDNKGLAEVSDIAEQVLNAVNKGFYKEATQLWGKAEMIIEKNTDGVNFYNILTKSTPD 279          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 100/225 (44.44%), Postives = 134/225 (59.56%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQLESVISQNSNSVDFYNFLLDS 686
            WWLY +    +N S+  P+++WLQGGPG S  G GNFEE+GPLDT LKPRN+TWL+ A LLFVDNPVGTG+SYV    ++ K+    A+D+  LL   F+ ++  Q  P +I +ESYGGK AA + +                     DSWISP D V SWGP L  MS LD  G A  + IA+++   +  G +  AT  W + E +I +N++ V+FYN L  S
Sbjct:   53 WWLYYATNPCKNFSE-LPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISVELYKAVQQGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSMSLLDNQGLAMVSDIAEQVLDAVNKGFYKEATQLWGKAEMIIEKNTDGVNFYNILTKS 276          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: VCP_AEDAE (Vitellogenic carboxypeptidase OS=Aedes aegypti GN=VCP PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 3
Query:   42 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTY----LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 395
            +N  +  PI++WLQGGPGAS +  G FEE GP   +    +K R  +W +   ++++DNPVGTG+S+ + +  +  N+     +L   + + F     L K P +I  ESYGGKF    G A
Sbjct:   99 KNNREQAPILVWLQGGPGASSL-FGMFEENGPFHIHRNKSVKQREYSWHQNHHMIYIDNPVGTGFSFTDSDEGYSTNEEHVGENLMKFIQQFFVLFPNLLKHPFYISGESYGGKFVPAFGYA 219          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNS--------TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 401
            P++LWL GGPG S +  G   E GP +   K +NS        +W K ++++++D+PVG G+SY  DN+ +  +D + A+D  T L+E F      Q +P FI  ESY G +  TL    V
Sbjct:   74 PVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAGIYVPTLAAEVV 193          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            P+ LWL GGPG S VG G F E+GP         L+  + +W K ++LLFVD+P G G+SY   +S +   D  AA+D+   L+  F+K   L+   LF+  ESY G +   L
Sbjct:   72 PLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNAGDKSAASDMLVFLLRWFDKFPELKSHDLFLTGESYAGHYIPQL 184          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16
Identity = 56/226 (24.78%), Postives = 101/226 (44.69%), Query Frame = 3
Query:   33 YRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAAT---------LGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQLESVISQNSNSVDFYN 671
            Y  +N     P+ILWL GGPG S + +  F E GP     +  L    ++W   A++L+VD+P+G G+SYV D+  +   + E + +L + L +  +K     K PL+I  ESY G +  +         LGLA +                  +  + P     S GP       LD N   ++  + +  +Q +++G++   T     +  ++ + + + + Y+
Sbjct:   45 YESQNSPSTDPLILWLTGGPGCSSL-MAAFYENGPYFVNDNLTLSENPNSWNMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISENLYSFLTQFLSKYPKYSKLPLYIFGESYAGHYVPSFSYYIYQKNLGLATI----------NLKGLAIGNGMVDPYIQYGSLGPFAYAHGMLDINALKETEGLYESCQQAIDSGDYNMTTQICNNIMDIVQEYAGNFNVYD 259          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16
Identity = 47/125 (37.60%), Postives = 66/125 (52.80%), Query Frame = 3
Query:   33 YRIENPSKP--WPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y +E   +P   P+ LWL GGPG S VG G F E+GP         L+  + +W K ++LLFV++P G G+SY   +S +   D    ND+   L+  FNK   L+   LF+  ESY G +   L
Sbjct:   63 YYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGDGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDMLVFLLRWFNKFPELKSRDLFLTGESYAGHYIPQL 187          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 3
Query:   33 YRIENPSKPWP---IILWLQGGPGASGVGIGNFEEVGPLD-----TYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 389
            Y  + P+ P P   +++WLQGGPG S + IGNF E+GP       T L+     W +   LLFVDNP+G G+S          N  + A  L   L+E   +N   +  P++   ESY GK+   +G
Sbjct:   55 YEAQEPTTPLPDTPLLVWLQGGPGCSSM-IGNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKYVPAIG 180          
The following BLAST results are available for this feature:
BLAST of CX290074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
SCP51_ARATH4.721e-9269.23Serine carboxypeptidase-like 51 OS=Arabidopsis tha... [more]
RISC_HUMAN1.064e-5144.00Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
RISC_RAT3.096e-5144.30Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_MOUSE3.096e-5144.44Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
VCP_AEDAE1.313e-1736.89Vitellogenic carboxypeptidase OS=Aedes aegypti GN=... [more]
SCP21_ARATH6.515e-1737.19Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP41_ARATH1.451e-1639.82Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCPL1_DICDI1.896e-1624.78Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
SCP43_ARATH1.896e-1637.60Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
SCP50_ARATH4.223e-1635.43Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC02020C01SK IF1 Citrus clementina cDNA clone C02020C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290074 ID=CX290074; Name=CX290074; organism=Citrus clementina; type=EST; length=735bp
ACACATGTCTTTGGTGGCTATATAAGAGTCCATACAGAATTGAAAATCCC
TCAAAGCCGTGGCCTATCATTCTTTGGTTGCAAGGCGGCCCTGGTGCTTC
AGGAGTTGGGATTGGGAATTTTGAAGAGGTTGGGCCATTAGACACTTATT
TGAAGCCAAGGAATTCAACATGGTTGAAGAAAGCTGACCTATTATTTGTT
GACAATCCTGTGGGAACAGGATACAGCTATGTTGAGGATAATAGCTCGTT
TGTGAAAAACGATGTTGAGGCAGCAAATGATTTAACTACATTGCTAATGG
AGTTATTTAACAAGAATGAAATTCTGCAAAAGAGTCCTCTGTTTATTGTG
GCAGAGTCTTATGGAGGCAAATTTGCTGCAACTCTCGGACTGGCAGCCGT
TAAAGCCATTGAAGCTGGAAAGTTAAAGCTCAAACTTGGAGGAGTTGCCT
TGGGAGATAGTTGGATCTCACCAGAGGATTTTGTGTTTTCATGGGGGCCT
CTACTTAAAGATATGTCAAGGCTTGATACCAATGGCTTCGCAAAATCAAA
TCAAATAGCTCAAAAGATTAAGCAGCAGCTTGAAGCTGGTGAATTTGTTA
GTGCCACAGACTCATGGGCGCAACTTGAGAGTGTGATTAGTCAAAACAGC
AACTCTGTGGATTTTTACAATTTTCTACTGGATTCGGGCATGGACCCTGT
GTCTTTACAGCATCACATTAGCAGTAGGAGCTTCA
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