CX290880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.197e-30 Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPLI YC LPAFCL+T +FI+PEISNYAS+ FI LFISIA TGILE++W GV I+DWWRNEQ WVIGG S+H F G Sbjct: 862 TSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQG 942
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.454e-30 Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPLI YC LPA CLLT KFI+PEISNYA + FI LF SI ATGILE++W GVGI+DWWRNEQ WVIGG S+H F G Sbjct: 857 TSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQG 937
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.454e-30 Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPLI YC LPA CLLT KFI+PEISNYA + FI LF SI ATGILE++W GVGI+DWWRNEQ WVIGG S+H F G Sbjct: 857 TSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQG 937
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.303e-30 Identity = 58/81 (71.60%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCTLPA CLLTGKFI PE++N ASL F+ LFI I TGILEM+W GV IDDWWRNEQ WVIGG SSH F G Sbjct: 874 TSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQG 954
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.215e-29 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PL+ YCTLPA CLLTGKFI+P IS +ASL FI LFISI ATGILEM+W GV I++WWRNEQ WVIGG S+H F + G Sbjct: 836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQG 916
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.215e-29 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PL+ YCTLPA CLLTGKFI+P IS +ASL FI LFISI ATGILEM+W GV I++WWRNEQ WVIGG S+H F + G Sbjct: 836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQG 916
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.707e-29 Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL++YCTLPA CL T +FI+P+ISN AS+ F+ LF+SI ATGILEM+W GVGID+WWRNEQ WVIGG S+H F G Sbjct: 847 TSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQG 927
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.876e-29 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCT+PA CLLTGKFI+P ++N AS+ FI LF+SI ATG+LE++W GV I+DWWRNEQ WVIGG S+H F G Sbjct: 844 TSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQG 924
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.755e-28 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PLI YC LPA CLLTGKFI+P +SN A++ F+GLFISI T +LE++W G+GI+DWWRNEQ WVIGG S+H F G Sbjct: 771 TSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQG 851
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.755e-28 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PLI YC LPA CLLTGKFI+P +SN A++ F+GLFISI T +LE++W G+GI+DWWRNEQ WVIGG S+H F G Sbjct: 771 TSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQG 851 The following BLAST results are available for this feature:
BLAST of CX290880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290880 ID=CX290880; Name=CX290880; organism=Citrus clementina; type=EST; length=251bpback to top |