CX290880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.795e-34 Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PLIVYC+LPA CLLTGKFIVPEISNYA ++F+ +FISIA TGILEMQWGGVGIDDWWRNEQ WVIGGASSH F G Sbjct: 866 TSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQG 946
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 5.270e-33 Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PLIVYC+LPA CLLTGKFIVPEISNYAS++F+ LF SIA TGILEMQWG VGIDDWWRNEQ WVIGG S+H F G Sbjct: 867 TSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQG 947
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 6.883e-33 Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+VYC+LPA CLLTGKFIVPEISNYAS++F+ LF SIA TGILEMQWG VGIDDWWRNEQ WVIGG S+H F G Sbjct: 852 TSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQG 932
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.003e-32 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PL+VYC+LPA CLLTGKFIVPEISNYA ++F+ +F+SIA TGILEMQWG +GIDDWWRNEQ WVIGG SSH F G Sbjct: 870 TSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQG 950
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.611e-32 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL++YC LPA CLLTGKFI+PEISN+AS+ FI LFISI ATGILEM+W GVGID+WWRNEQ WVIGG S+H F G Sbjct: 863 TSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQG 943
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.892e-31 Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL++YC LPA CLLTGKFI+PEISN+AS+ FI LF+SI ATGILEM+W GVGID+WWRNEQ WVIGG S+H F G Sbjct: 855 TSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQG 935
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.892e-31 Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL++YC LPA CLLTGKFI+PEISN+AS+ FI LF+SI ATGILEM+W GVGID+WWRNEQ WVIGG S+H F G Sbjct: 855 TSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQG 935
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.443e-31 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCTLPA CLLTGKFI PE++N ASL F+ LFI I ATGILEM+W GVGIDDWWRNEQ WVIGG SSH F G Sbjct: 874 TSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQG 954
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.443e-31 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCTLPA CLLTGKFI PE++N ASL F+ LFI I ATGILEM+W GVGIDDWWRNEQ WVIGG SSH F G Sbjct: 874 TSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQG 954
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.443e-31 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCTLPA CLLTGKFI PE++N ASL F+ LFI I ATGILEM+W GVGIDDWWRNEQ WVIGG SSH F G Sbjct: 875 TSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQG 955 The following BLAST results are available for this feature:
BLAST of CX290880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290880 ID=CX290880; Name=CX290880; organism=Citrus clementina; type=EST; length=251bpback to top |